RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TRIM10Q9UDY6 481 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 DDX20Q9UHI6 824 aaKnown RBP9.53□□□□□ -0.88
PHGDH-219ENST00000641513 TSKSQ9UJT2 592 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 COQ4Q9Y3A0 265 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 PTPRJQ12913 1337 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 RBAK-RBAKDNI3L0D1 243 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 FOXN3O00409 490 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 PJA2O43164 708 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 FAM189A1O60320 539 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 ZC3H11AO75152 810 aaKnown RBP eCLIP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 ADAMTS4O75173 837 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 KRT19P08727 400 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 CLTAP09496 248 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 DARSP14868 501 aaKnown RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 EIF4BP23588 611 aaKnown RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 NAP1L1P55209 391 aaKnown RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 MCCD1P59942 119 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 CLDN10P78369 228 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 PTK2Q05397 1052 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 GPS2Q13227 327 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 NCOA4Q13772 614 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 SLC18A3Q16572 532 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 KYAT1Q16773 422 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 DUOXA2Q1HG44 320 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 DCAF4L1Q3SXM0 396 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 TAF3Q5VWG9 929 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 SPOPLQ6IQ16 392 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 GDF6Q6KF10 455 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 TAF2Q6P1X5 1199 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 C15orf39Q6ZRI6 1047 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 ZNF571Q7Z3V5 609 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 RNF180Q86T96 592 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 TMEM192Q8IY95 271 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 NME8Q8N427 588 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 SLAIN1Q8ND83 568 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 PXYLP1Q8TE99 480 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 U2AF1L4Q8WU68 220 aaKnown RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 ZNF296Q8WUU4 475 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 KAT5Q92993 513 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 FAM81BQ96LP2 452 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 ACAP3Q96P50 834 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 APOL6Q9BWW8 343 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 IRX2Q9BZI1 471 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 TRIM6Q9C030 488 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 MTMR12Q9C0I1 747 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 VIPAS39Q9H9C1 493 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 HMX1Q9NP08 348 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-219ENST00000641513 ADAMTS1Q9UHI8 967 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 GTF2IRD1Q9UHL9 959 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 TRIM17Q9Y577 477 aa9.52□□□□□ -0.89
PHGDH-219ENST00000641513 A0A087X0T9 212 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 A0A1B0GUA9 196 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 MACROD2A1Z1Q3 448 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 LACTBL1A8MY62 500 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 TMCO5BA8MYB1 307 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 ZNF263O14978 683 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 VNN1O95497 513 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 ABL1P00519 1130 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 CTSHP09668 335 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 FAM228BP0C875 321 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 GRK4P32298 578 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 PRKCIP41743 596 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 PLA2G4AP47712 749 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 CRYBB1P53674 252 aaPredicted RBP9.51□□□□□ -0.89
PHGDH-219ENST00000641513 PRMT2P55345 433 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 ADAM17P78536 824 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 MRPS6P82932 125 aaKnown RBP9.51□□□□□ -0.89
PHGDH-219ENST00000641513 SNX17Q15036 470 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 ASTE1Q2TB18 679 aaPredicted RBP9.51□□□□□ -0.89
PHGDH-219ENST00000641513 MAP9Q49MG5 647 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 NOTUMQ6P988 496 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 SLC27A1Q6PCB7 646 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 ENOSF1Q7L5Y1 443 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 RNF10Q8N5U6 811 aaKnown RBP9.51□□□□□ -0.89
PHGDH-219ENST00000641513 KLHDC9Q8NEP7 349 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 TRIM58Q8NG06 486 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 HELQQ8TDG4 1101 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 KREMEN1Q96MU8 473 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 AGPAT1Q99943 283 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 FUT8Q9BYC5 575 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 CELF4Q9BZC1 486 aaKnown RBP9.51□□□□□ -0.89
PHGDH-219ENST00000641513 GPR88Q9GZN0 384 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 ZMYND15Q9H091 742 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 ACBD3Q9H3P7 528 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 ANKZF1Q9H8Y5 726 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 SAGE1Q9NXZ1 904 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 PRDM4Q9UKN5 801 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 PIN4Q9Y237 131 aaKnown RBP9.51□□□□□ -0.89
PHGDH-219ENST00000641513 NOD1Q9Y239 953 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 TRPV2Q9Y5S1 764 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 CDY2AQ9Y6F7 541 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 SCN1AP35498 2009 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 MROH7Q68CQ1 1323 aa9.51□□□□□ -0.89
PHGDH-219ENST00000641513 FAM170AA1A519 330 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 CYP26A1O43174 497 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 SGPL1O95470 568 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 MYCP01106 439 aaPredicted RBP9.5□□□□□ -0.89
PHGDH-219ENST00000641513 NFICP08651 508 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 AXLP30530 894 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms