RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-215	ENST00000641371	KRT5	P13647	590 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	CYP11B1	P15538	503 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	HSPA6	P17066	643 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	ATF7	P17544	494 aa	Predicted RBP	10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	USP8	P40818	1118 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	TFAM	Q00059	246 aa	Known RBP	10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	CACNB2	Q08289	660 aa	Predicted RBP	10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	TMEM132D	Q14C87	1099 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	KIZ	Q2M2Z5	673 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	ZNF699	Q32M78	642 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	MAP3K21	Q5TCX8	1036 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	EEF1DP3	Q658K8	133 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	RPUSD2	Q8IZ73	545 aa	Known RBP	10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	TRPV1	Q8NER1	839 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	VCPIP1	Q96JH7	1222 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	ZIC5	Q96T25	663 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	TRIM6	Q9C030	488 aa	Predicted RBP	10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	MTMR12	Q9C0I1	747 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	FAM49A	Q9H0Q0	323 aa	Predicted RBP	10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	CHST12	Q9NRB3	414 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	RNF186	Q9NXI6	227 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	HDAC6	Q9UBN7	1215 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	DDX20	Q9UHI6	824 aa	Known RBP	10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	HYOU1	Q9Y4L1	999 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	CEP83	Q9Y592	693 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	TRPV2	Q9Y5S1	764 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	SQOR	Q9Y6N5	450 aa		10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371	TRIP12	Q14669	1992 aa	Predicted RBP	10.43	□□□□□ -0.74
PHGDH-215	ENST00000641371		A0A0U1RQG5	324 aa	Predicted RBP	10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	RCCD1	A6NED2	376 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	GPR25	O00155	361 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	TREH	O43280	583 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	MTA2	O94776	668 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	CD4	P01730	458 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	IQCF3	P0C7M6	154 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	CXCL8	P10145	99 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	PRKAR2A	P13861	404 aa	Known RBP	10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	PAX3	P23760	479 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	TNFSF9	P41273	254 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	GPC5	P78333	572 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	MRPS6	P82932	125 aa	Known RBP	10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	RBP5	P82980	135 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	BEX3	Q00994	111 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	AMPD2	Q01433	879 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	ITIH3	Q06033	890 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	MYO1E	Q12965	1108 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	SNX17	Q15036	470 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	ZNF667	Q5HYK9	610 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	ZBTB41	Q5SVQ8	909 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	CCDC70	Q6NSX1	233 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	GLYCTK	Q8IVS8	523 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	USP38	Q8NB14	1042 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	BEST2	Q8NFU1	509 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	OR5B17	Q8NGF7	314 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	LNX1	Q8TBB1	728 aa	Predicted RBP	10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	DNAJB3	Q8WWF6	145 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	UBXN4	Q92575	508 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	GOLGA1	Q92805	767 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	FAM212A	Q96EL1	285 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	CELF4	Q9BZC1	486 aa	Known RBP	10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	IRX2	Q9BZI1	471 aa	Predicted RBP	10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	ZNF518B	Q9C0D4	1074 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	SEPT11	Q9NVA2	429 aa	Known RBP	10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	UVRAG	Q9P2Y5	699 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	NOCT	Q9UK39	431 aa	Known RBP	10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	SNX12	Q9UMY4	172 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	PCDHB4	Q9Y5E5	795 aa		10.42	□□□□□ -0.74
PHGDH-215	ENST00000641371	PTPRJ	Q12913	1337 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	CTAGE15	A4D2H0	777 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	TTLL13P	A6NNM8	815 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	LACTBL1	A8MY62	500 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	TULP1	O00294	542 aa	Predicted RBP	10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	GPR182	O15218	404 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	CYP26A1	O43174	497 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	MED7	O43513	233 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	CLSTN1	O94985	981 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	LSM8	O95777	96 aa	Known RBP	10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	PAEP	P09466	180 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	CTAGE8	P0CG41	777 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	SKI	P12755	728 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	CYP3A5	P20815	502 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	MCM3	P25205	808 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	PNPLA4	P41247	253 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	PAFAH1B1	P43034	410 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	NOP2	P46087	812 aa	Known RBP	10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	GALC	P54803	685 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	STIL	Q15468	1287 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	ACAD10	Q6JQN1	1059 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	CTAGE6	Q86UF2	777 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	SERINC5	Q86VE9	423 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	CTAGE4	Q8IX94	777 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	EFCAB13	Q8IY85	973 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	LRRC52	Q8N7C0	313 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	ARRDC4	Q8NCT1	418 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	MSANTD4	Q8NCY6	345 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	RUBCN	Q92622	972 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	TATDN2	Q93075	761 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	PBK	Q96KB5	322 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	OSMR	Q99650	979 aa		10.41	□□□□□ -0.74
PHGDH-215	ENST00000641371	ARHGAP39	Q9C0H5	1083 aa		10.41	□□□□□ -0.74

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