RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, human

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCN1B-208	ENST00000640135	DBR1	Q9UK59	544 aa	Known RBP	11.64	□□□□□ -0.55
SCN1B-208	ENST00000640135	HPS5	Q9UPZ3	1129 aa		11.64	□□□□□ -0.55
SCN1B-208	ENST00000640135	MYB	P10242	640 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	FDPS	P14324	419 aa	Known RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	AXL	P30530	894 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	AMPD2	Q01433	879 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	DEUP1	Q05D60	604 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	GTF2H3	Q13889	308 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	FBXO16	Q8IX29	292 aa	Predicted RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	UCMA	Q8WVF2	138 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	SH2D3A	Q9BRG2	576 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	CENPK	Q9BS16	269 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	PGK2	P07205	417 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	MTA1	Q13330	715 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	CHADL	Q6NUI6	762 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	WDR75	Q8IWA0	830 aa	Known RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	TRIM59	Q8IWR1	403 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	ATP11C	Q8NB49	1132 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	ULK4	Q96C45	1275 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135		A0A1B0GTH6	734 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	PDGFRB	P09619	1106 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	MAPT	P10636	758 aa	Known RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	CCDC38	Q502W7	563 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	FBXL16	Q8N461	479 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	USP13	Q92995	863 aa	Predicted RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	PXDN	Q92626	1479 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	GOLGA8M	H3BSY2	632 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	B3GAT3	O94766	335 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	TM4SF1	P30408	202 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	PTPN21	Q16825	1174 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	CFAP61	Q8NHU2	1237 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	MRPS31	Q92665	395 aa	Known RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	SYN2	Q92777	582 aa	Predicted RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	FOPNL	Q96NB1	174 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	YME1L1	Q96TA2	773 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	DPP3	Q9NY33	737 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	PCDHB12	Q9Y5F1	795 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	GAK	O14976	1311 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	MYPN	Q86TC9	1320 aa		11.63	□□□□□ -0.55
SCN1B-208	ENST00000640135	TBC1D12	O60347	775 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	F9	P00740	461 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	UGP2	Q16851	508 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	ATPAF2	Q8N5M1	289 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	ATP6V0D2	Q8N8Y2	350 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	OR6P1	Q8NGX9	317 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	ATL2	Q8NHH9	583 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	MRPL9	Q9BYD2	267 aa	Known RBP	11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	KCNQ5	Q9NR82	932 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	ADGRG1	Q9Y653	693 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	RAG1	P15918	1043 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	ATIC	P31939	592 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	MTHFD1L	Q6UB35	978 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	DDX53	Q86TM3	631 aa	Known RBP	11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	DPF3	Q92784	378 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	AGO4	Q9HCK5	861 aa	Known RBP	11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	AGPAT3	Q9NRZ7	376 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	SNX24	Q9Y343	169 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135		A0A1W2PQJ5	194 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	TH	P07101	528 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	GUCY2C	P25092	1073 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	LHX1	P48742	406 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	SLC11A2	P49281	568 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	ERVK-9	P63128	1117 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	ERVK-24	P63145	666 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	PDK1	Q15118	436 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	CRLF3	Q8IUI8	442 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	TMC2	Q8TDI7	906 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135		A0A087WUV0	522 aa	Predicted RBP	11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	DFFA	O00273	331 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	FOXN1	O15353	648 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	TEX33	O43247	280 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	KDM1A	O60341	852 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	KRT14	P02533	472 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	SPARCL1	Q14515	664 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	BOLA3	Q53S33	107 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	TTC19	Q6DKK2	380 aa	Predicted RBP	11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	FOXP3	Q9BZS1	431 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	CYP3A43	Q9HB55	503 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	XPNPEP3	Q9NQH7	507 aa		11.62	□□□□□ -0.55
SCN1B-208	ENST00000640135	CHGB	P05060	677 aa		11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	IFNAR2	P48551	515 aa		11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	YWHAH	Q04917	246 aa	Predicted RBP	11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	DEFB115	Q30KQ5	88 aa		11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	ZNF280D	Q6N043	979 aa		11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	SNF8	Q96H20	258 aa		11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	P2RX7	Q99572	595 aa	Known RBP	11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	TRIM45	Q9H8W5	580 aa	Predicted RBP	11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	RSAD1	Q9HA92	442 aa		11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	SENP2	Q9HC62	589 aa		11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	TCRBV5S4A2T	A0A5A2	114 aa		11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	CFAP99	D6REC4	459 aa		11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	SRGAP2	O75044	1071 aa		11.61	□□□□□ -0.55
SCN1B-208	ENST00000640135	HSPA4L	O95757	839 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms