RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 SLC45A1Q9Y2W3 748 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 TNKSO95271 1327 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 F5H6K3 240 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 CNMDO75829 334 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 TTLL1O95922 423 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 NDUFB10O96000 172 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 IFNAR1P17181 557 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 MARCKSP29966 332 aaPredicted RBP6.86□□□□□ -1.31
ATM-229ENST00000639953 PSMC4P43686 418 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 KCNC1P48547 511 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 NDUFA8P51970 172 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 HMGN5P82970 282 aaKnown RBP6.86□□□□□ -1.31
ATM-229ENST00000639953 LACTBP83111 547 aaPredicted RBP6.86□□□□□ -1.31
ATM-229ENST00000639953 KLRC3Q07444 240 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 PABPC4Q13310 644 aaKnown RBP eCLIP6.86□□□□□ -1.31
ATM-229ENST00000639953 WTAPQ15007 396 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 SPECC1Q5M775 1068 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 SHC4Q6S5L8 630 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 USP49Q70CQ1 688 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 OTOP1Q7RTM1 612 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 C17orf53Q8N3J3 647 aaPredicted RBP6.86□□□□□ -1.31
ATM-229ENST00000639953 FSIP1Q8NA03 581 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 FANCBQ8NB91 859 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 PAGR1Q9BTK6 254 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 ZSCAN16Q9H4T2 348 aaPredicted RBP6.86□□□□□ -1.31
ATM-229ENST00000639953 FBXO28Q9NVF7 368 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 BTBD7Q9P203 1132 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 RBPJLQ9UBG7 517 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 USP25Q9UHP3 1055 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 ISY1Q9ULR0 285 aaKnown RBP6.86□□□□□ -1.31
ATM-229ENST00000639953 STX8Q9UNK0 236 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 TRIM17Q9Y577 477 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 A0A0G2JMZ2 1700 aa6.86□□□□□ -1.31
ATM-229ENST00000639953 PLXNB2O15031 1838 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 BRCA2P51587 3418 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 A0A1W2PQH9 124 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 WDR46O15213 610 aaKnown RBP6.85□□□□□ -1.31
ATM-229ENST00000639953 PRICKLE3O43900 615 aaPredicted RBP6.85□□□□□ -1.31
ATM-229ENST00000639953 CELA3BP08861 270 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 TROAPQ12815 778 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 IQCB1Q15051 598 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 SF3A1Q15459 793 aaKnown RBP6.85□□□□□ -1.31
ATM-229ENST00000639953 ANO6Q4KMQ2 910 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 VWA3BQ502W6 1294 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 ANO1Q5XXA6 986 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 ADAT2Q7Z6V5 191 aaKnown RBP6.85□□□□□ -1.31
ATM-229ENST00000639953 CTU1Q7Z7A3 348 aaKnown RBP6.85□□□□□ -1.31
ATM-229ENST00000639953 LUZP1Q86V48 1076 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 CPNE8Q86YQ8 564 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 RGS22Q8NE09 1264 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 NUP133Q8WUM0 1156 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 PIBF1Q8WXW3 757 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 ESR2Q92731 530 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 MKL1Q969V6 931 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 ERO1AQ96HE7 468 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 TMEM47Q9BQJ4 181 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 KRT23Q9C075 422 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 KLHL25Q9H0H3 589 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 NUP62CLQ9H1M0 184 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 RNF41Q9H4P4 317 aaPredicted RBP6.85□□□□□ -1.31
ATM-229ENST00000639953 SH2D4AQ9H788 454 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 GABRQQ9UN88 632 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 RWDD3Q9Y3V2 267 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 DNAH12Q6ZR08 3092 aa6.85□□□□□ -1.31
ATM-229ENST00000639953 DOCK3Q8IZD9 2030 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 FRMPD2Q68DX3 1309 aaPredicted RBP6.84□□□□□ -1.31
ATM-229ENST00000639953 A0A087X0B3 334 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 CCDC69A6NI79 296 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 STXBP3O00186 592 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 AURKAO14965 403 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 EDIL3O43854 480 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 FLOT1O75955 427 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 ADCY5O95622 1261 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 EPHX1P07099 455 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 ASGR2P07307 311 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 GLI4P10075 376 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 PCP11498 1178 aaKnown RBP6.84□□□□□ -1.31
ATM-229ENST00000639953 U2AF2P26368 475 aaKnown RBP eCLIP6.84□□□□□ -1.311e-8■□□□□ 10.6
ATM-229ENST00000639953 GCLCP48506 637 aaPredicted RBP6.84□□□□□ -1.31
ATM-229ENST00000639953 NOVP48745 357 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 SNAP25P60880 206 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 SSRP1Q08945 709 aaKnown RBP6.84□□□□□ -1.31
ATM-229ENST00000639953 CCDC173Q0VFZ6 552 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 TRDNQ13061 729 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 COG2Q14746 738 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 KIF22Q14807 665 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 SLC39A14Q15043 492 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 IL17AQ16552 155 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 FAM110CQ1W6H9 321 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 TMCO4Q5TGY1 634 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 SLFN13Q68D06 897 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 HEATR6Q6AI08 1181 aaKnown RBP6.84□□□□□ -1.31
ATM-229ENST00000639953 ISM2Q6H9L7 571 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 KCTD1Q719H9 257 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 GMCL1P1Q8NEA9 526 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 LPAR1Q92633 364 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 SPATA25Q9BR10 227 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 SCAND2PQ9GZW5 306 aaPredicted RBP6.84□□□□□ -1.31
ATM-229ENST00000639953 PORCNQ9H237 461 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms