RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 EDN1P05305 212 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 MYL3P08590 195 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 MCM3P25205 808 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 NAMPTP43490 491 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 SLC7A5Q01650 507 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 C9orf50Q5SZB4 431 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 FAM109BQ6ICB4 259 aaPredicted RBP14.9□□□□□ -0.02
ATRIP-208ENST00000639561 TMEM199Q8N511 208 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 DEFB123Q8N688 67 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 EPS8L1Q8TE68 723 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 RFFLQ8WZ73 363 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 SHC3Q92529 594 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 KCNN1Q92952 543 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 ZBTB9Q96C00 473 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 NOCTQ9UK39 431 aaKnown RBP14.9□□□□□ -0.02
ATRIP-208ENST00000639561 STXBP5LQ9Y2K9 1186 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 SCN10AQ9Y5Y9 1956 aa14.9□□□□□ -0.02
ATRIP-208ENST00000639561 LRRIQ4A6NIV6 560 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 H0YCG3 227 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 TGFB3P10600 412 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 USP8P40818 1118 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 LIG4P49917 911 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 STAT5BP51692 787 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 RNASE9P60153 205 aaKnown RBP14.89□□□□□ -0.03
ATRIP-208ENST00000639561 PURAQ00577 322 aaKnown RBP14.89□□□□□ -0.03
ATRIP-208ENST00000639561 DRP2Q13474 957 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 PRPF4BQ13523 1007 aaKnown RBP14.89□□□□□ -0.03
ATRIP-208ENST00000639561 CCNI2Q6ZMN8 369 aaPredicted RBP14.89□□□□□ -0.03
ATRIP-208ENST00000639561 DAAM2Q86T65 1068 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 NOP9Q86U38 636 aaKnown RBP14.89□□□□□ -0.03
ATRIP-208ENST00000639561 FBXL13Q8NEE6 735 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 AFAP1L1Q8TED9 768 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 CTNNBL1Q8WYA6 563 aaPredicted RBP14.89□□□□□ -0.03
ATRIP-208ENST00000639561 RNPC3Q96LT9 517 aaKnown RBP14.89□□□□□ -0.03
ATRIP-208ENST00000639561 RAB20Q9NX57 234 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 H3BQF6 201 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 CYP26A1O43174 497 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 BUB1BO60566 1050 aaPredicted RBP14.89□□□□□ -0.03
ATRIP-208ENST00000639561 GH1P01241 217 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 GTF2H1P32780 548 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 NLRP11P59045 1033 aaKnown RBP14.89□□□□□ -0.03
ATRIP-208ENST00000639561 HSDL1Q3SXM5 330 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 NT5DC3Q86UY8 548 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 SLC47A2Q86VL8 602 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 TRIM50Q86XT4 487 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 RPUSD2Q8IZ73 545 aaKnown RBP14.89□□□□□ -0.03
ATRIP-208ENST00000639561 ZNF516Q92618 1163 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 PDE11AQ9HCR9 933 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 COG5Q9UP83 839 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 STYXL1Q9Y6J8 313 aa14.89□□□□□ -0.03
ATRIP-208ENST00000639561 A6NJR5 290 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 ZNF233A6NK53 670 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 CES2O00748 559 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 EXTL3O43909 919 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 CHRNB2P17787 502 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 OAS2P29728 719 aaKnown RBP14.88□□□□□ -0.03
ATRIP-208ENST00000639561 SMAD3P84022 425 aaKnown RBP14.88□□□□□ -0.03
ATRIP-208ENST00000639561 GABPB1Q06547 395 aaPredicted RBP14.88□□□□□ -0.03
ATRIP-208ENST00000639561 STRN3Q13033 797 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 LMBRD2Q68DH5 695 aaPredicted RBP14.88□□□□□ -0.03
ATRIP-208ENST00000639561 CCDC62Q6P9F0 684 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 PEX26Q7Z412 305 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 DEPTORQ8TB45 409 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 SEPT1Q8WYJ6 367 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 ZBTB45Q96K62 511 aaPredicted RBP14.88□□□□□ -0.03
ATRIP-208ENST00000639561 GDAP1L1Q96MZ0 367 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 PCDHB18PQ96TA0 734 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 GRIN2DO15399 1336 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 ANKRD62A6NC57 917 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 PIGRP01833 764 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 ABCD1P33897 745 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 ACOT2P49753 483 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 MFAP3P55082 362 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 CAPSQ13938 189 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 ZBTB41Q5SVQ8 909 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 TAF3Q5VWG9 929 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 CCDC70Q6NSX1 233 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 C8orf74Q6P047 294 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 CRELD2Q6UXH1 353 aaPredicted RBP14.88□□□□□ -0.03
ATRIP-208ENST00000639561 C15orf39Q6ZRI6 1047 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 METTL13Q8N6R0 699 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 USP38Q8NB14 1042 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 PSPC1Q8WXF1 523 aaKnown RBP14.88□□□□□ -0.03
ATRIP-208ENST00000639561 DHX38Q92620 1227 aaKnown RBP14.88□□□□□ -0.03
ATRIP-208ENST00000639561 TAF4BQ92750 862 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 TATDN2Q93075 761 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 PI4K2AQ9BTU6 479 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 PPP1R12CQ9BZL4 782 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 STIM2Q9P246 746 aa14.88□□□□□ -0.03
ATRIP-208ENST00000639561 PTPRJQ12913 1337 aa14.87□□□□□ -0.03
ATRIP-208ENST00000639561 K7ERI5 159 aa14.87□□□□□ -0.03
ATRIP-208ENST00000639561 MARK3P27448 753 aa14.87□□□□□ -0.03
ATRIP-208ENST00000639561 RFC5P40937 340 aa14.87□□□□□ -0.03
ATRIP-208ENST00000639561 CLDN10P78369 228 aa14.87□□□□□ -0.03
ATRIP-208ENST00000639561 ENPEPQ07075 957 aa14.87□□□□□ -0.03
ATRIP-208ENST00000639561 ZNF697Q5TEC3 545 aa14.87□□□□□ -0.03
ATRIP-208ENST00000639561 FAM160B1Q5W0V3 765 aa14.87□□□□□ -0.03
ATRIP-208ENST00000639561 PSRC1Q6PGN9 363 aaPredicted RBP14.87□□□□□ -0.03
ATRIP-208ENST00000639561 KCNV1Q6PIU1 500 aa14.87□□□□□ -0.03
ATRIP-208ENST00000639561 USP37Q86T82 979 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms