RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ACSF2Q96CM8 615 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 KIF12Q96FN5 646 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 MSTO1Q9BUK6 570 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 RPF1Q9H9Y2 349 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 ZDHHC7Q9NXF8 308 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 MTRRQ9UBK8 725 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 SEL1LQ9UBV2 794 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 TUBGCP4Q9UGJ1 667 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 FBXW11Q9UKB1 542 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 A0A0B4J269 797 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 TTC26A0AVF1 554 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 PPP6R2O75170 966 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 ZMYND10O75800 440 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 YEATS4O95619 227 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 F13A1P00488 732 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 IDEP14735 1019 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 GAP43P17677 238 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 OR1D2P34982 312 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 HFE2Q6ZVN8 426 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 ZNF720Q7Z2F6 126 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 ZNF707Q96C28 371 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 DNAJC19Q96DA6 116 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 ST6GALNAC4Q9H4F1 302 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 MRPL44Q9H9J2 332 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 WDR6Q9NNW5 1121 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 TBC1D7Q9P0N9 293 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 LIMD1Q9UGP4 676 aa18.25■□□□□ 0.51
CACNA1A-259ENST00000638114 CLUHO75153 1309 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 TMEM221A6NGB7 291 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 LACTBL1A8MY62 500 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 ANKRD63C9JTQ0 380 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 M0R296 226 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 FAM189A1O60320 539 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 ASGR2P07307 311 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 MCM4P33991 863 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 SIGLEC14Q08ET2 396 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 RAB33AQ14088 237 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 ENOX2Q16206 610 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 STAMQ92783 540 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 HVCN1Q96D96 273 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 FAM212AQ96EL1 285 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 RHOBTB2Q9BYZ6 727 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 PRKD2Q9BZL6 878 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 UBQLN1Q9UMX0 589 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 SORCS3Q9UPU3 1222 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 BACE2Q9Y5Z0 518 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 CDY1Q9Y6F8 540 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 MYO10Q9HD67 2058 aa18.24■□□□□ 0.51
CACNA1A-259ENST00000638114 TISP43B9A030 160 aa18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 SYN3O14994 580 aa18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 CUTAO60888 179 aa18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 C8AP07357 584 aa18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 GBP2P32456 591 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 MTMR3Q13615 1198 aa18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 PKP1Q13835 747 aa18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 PPM1LQ5SGD2 360 aa18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 VARS2Q5ST30 1063 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 ADALQ6DHV7 355 aa18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 SLFN12LQ6IEE8 588 aa18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 RSPO2Q6UXX9 243 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 TMEM130Q8N3G9 435 aa18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 SUSD3Q96L08 255 aa18.23■□□□□ 0.51
CACNA1A-259ENST00000638114 XPOTO43592 962 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 GCNT3O95395 438 aa18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 PAPLNO95428 1278 aa18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 ACOT2P49753 483 aa18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 SLC7A14Q8TBB6 771 aa18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 MFSD14AQ96MC6 490 aa18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 IKZF4Q9H2S9 585 aa18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 PANK4Q9NVE7 773 aa18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 CPSF3Q9UKF6 684 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 AGO2Q9UKV8 859 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 EXOC7Q9UPT5 735 aa18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.22■□□□□ 0.51
CACNA1A-259ENST00000638114 H7C4K7 107 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 PPP1R37O75864 691 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 HNRNPA1P09651 372 aaKnown RBP eCLIP18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 CYP3A5P20815 502 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 LRPAP1P30533 357 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 GUCY2FP51841 1108 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 ARPP19P56211 112 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 ZBTB6Q15916 424 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 AXDND1Q5T1B0 1012 aaPredicted RBP18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 L1TD1Q5T7N2 865 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 JADE1Q6IE81 842 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 SHC4Q6S5L8 630 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 CD302Q8IX05 232 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 KCNG4Q8TDN1 519 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 POMGNT1Q8WZA1 660 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 PBXIP1Q96AQ6 731 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 DHX58Q96C10 678 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 ACCSQ96QU6 501 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 TSPAN18Q96SJ8 248 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 OLFML3Q9NRN5 406 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 POLIQ9UNA4 740 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 STYXL1Q9Y6J8 313 aa18.21■□□□□ 0.51
CACNA1A-259ENST00000638114 CCL16O15467 120 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 N4BP1O75113 896 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 XYLBO75191 536 aa18.2■□□□□ 0.5
CACNA1A-259ENST00000638114 ADRB2P07550 413 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms