RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ADAM22Q9P0K1 906 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 A0A1B0GW55 424 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 FGGP02679 453 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 DUX4L2P0CJ85 424 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 DUX4L3P0CJ86 424 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 DUX4L4P0CJ87 422 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 DUX4L5P0CJ88 424 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 DUX4L6P0CJ89 424 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 DUX4L7P0CJ90 424 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 SPP2Q13103 211 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 DDX39BQ13838 428 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 SYNE4Q8N205 404 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 SPRTNQ9H040 489 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 DUX4Q9UBX2 424 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 ADAM21Q9UKJ8 722 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 ANGPT2O15123 496 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 GSTM1P09488 218 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 ENO3P13929 434 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 NCKAP1LP55160 1127 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 CUL4AQ13619 759 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 SLC39A14Q15043 492 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 ZMYM1Q5SVZ6 1142 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 GPT2Q8TD30 523 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 GFM2Q969S9 779 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 RGS12O14924 1447 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 TPI1P60174 286 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 IL17REQ8NFR9 667 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 PEG3Q9GZU2 1588 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 hCG_1984214I3L0E3 225 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 RARBP10826 455 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 CHI3L1P36222 383 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 ALDH7A1P49419 539 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 ZNF211Q13398 564 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 ZNF713Q8N859 430 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 SRPRBQ9Y5M8 271 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 NAALADL2Q58DX5 795 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 SPATA2Q9UM82 520 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 YWHAQP27348 245 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 PLOD1Q02809 727 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 SNRNP27Q8WVK2 155 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 GNA15P30679 374 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 CDK8P49336 464 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 VTI1BQ9UEU0 232 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 ZNF746Q6NUN9 644 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 LRRC8BQ6P9F7 803 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 CNGB3Q9NQW8 809 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 ATP6V1HQ9UI12 483 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 EIF2B5Q13144 721 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 CBFBQ13951 182 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 PARP9Q8IXQ6 854 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 GABBR1Q9UBS5 961 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 PCDHGA3Q9Y5H0 932 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 ARAP3Q8WWN8 1544 aa17.13■□□□□ 0.33
CACNA1A-258ENST00000638029 MYO1CO00159 1063 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 AP1G2O75843 785 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 TIPRLO75663 272 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 ASNSP08243 561 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 DPCR1Q3MIW9 517 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 ARHGEF25Q86VW2 580 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 ZSWIM5Q9P217 1185 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 RPS6KB2Q9UBS0 482 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 KIF1CO43896 1103 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 DLGAP3O95886 979 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 JAK3P52333 1124 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 ANO5Q75V66 913 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 OSBPL6Q9BZF3 934 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 THAP9Q9H5L6 903 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 POTEFA5A3E0 1075 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 GCLMP48507 274 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 ADCY2Q08462 1091 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 R3HDM1Q15032 1099 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 LAYNQ6UX15 382 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 PID1Q7Z2X4 250 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 DEFB128Q7Z7B8 93 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 APOBEC3FQ8IUX4 373 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 PMM1Q92871 262 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 NARS2Q96I59 477 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 OLFM3Q96PB7 478 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 ECE2O60344 883 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 ITGA3P26006 1051 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 ROR1Q01973 937 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 LRRC63Q05C16 580 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 PRAMEF18Q5VWM3 479 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 NSMCE4AQ9NXX6 385 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 RGS7P49802 495 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 ST13P50502 369 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 ARL4CP56559 192 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 GSTA3Q16772 222 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 KRT37O76014 449 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 LCORLQ8N3X6 602 aa17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 DDX56Q9NY93 547 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-258ENST00000638029 KCNN4O15554 427 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 KRT33AO76009 404 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 ABI2Q9NYB9 513 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 TRAPPC3O43617 180 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 CYP26B1Q9NR63 512 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 ADAMTS12P58397 1594 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 CRKP46108 304 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms