RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 MAP4K3Q8IVH8 894 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 KIF12Q96FN5 646 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 PLEKHA4Q9H4M7 779 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 MTRRQ9UBK8 725 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 HCN4Q9Y3Q4 1203 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 CDY1Q9Y6F8 540 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 CLUHO75153 1309 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 LACTBL1A8MY62 500 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 PPEF2O14830 753 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 ZMYND10O75800 440 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 CLTAP09496 248 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 TXLNAP40222 546 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 STAT6P42226 847 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 CASP5P51878 434 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 ZDHHC14Q8IZN3 488 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 MYADMQ96S97 322 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 MSTO1Q9BUK6 570 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 WDR6Q9NNW5 1121 aaKnown RBP19.32■□□□□ 0.68
PNKP-230ENST00000638016 USTQ9Y2C2 406 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 MORC2Q9Y6X9 1032 aaPredicted RBP19.32■□□□□ 0.68
PNKP-230ENST00000638016 WDFY4Q6ZS81 3184 aa19.32■□□□□ 0.68
PNKP-230ENST00000638016 NOTCH4Q99466 2003 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 A0A0B4J269 797 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 SPTLC2O15270 562 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 OGTO15294 1046 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 CCL16O15467 120 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 PPP1R37O75864 691 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 C8AP07357 584 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 HSP90AA1P07900 732 aaKnown RBP19.31■□□□□ 0.68
PNKP-230ENST00000638016 ACOT2P49753 483 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 SIGLEC14Q08ET2 396 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 VARS2Q5ST30 1063 aaKnown RBP19.31■□□□□ 0.68
PNKP-230ENST00000638016 SV2BQ7L1I2 683 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 SLC7A14Q8TBB6 771 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 RSAD2Q8WXG1 361 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 FAM212AQ96EL1 285 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 CHAMP1Q96JM3 812 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 PRKD2Q9BZL6 878 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 PIDD1Q9HB75 910 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 NUB1Q9Y5A7 615 aa19.31■□□□□ 0.68
PNKP-230ENST00000638016 PAPLNO95428 1278 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 F13A1P00488 732 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 NFICP08651 508 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 ZSCAN22P10073 491 aaPredicted RBP19.3■□□□□ 0.68
PNKP-230ENST00000638016 IDEP14735 1019 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 GBP2P32456 591 aaPredicted RBP19.3■□□□□ 0.68
PNKP-230ENST00000638016 MCM4P33991 863 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 PPP2R3AQ06190 1150 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 RAB33AQ14088 237 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 ZBTB6Q15916 424 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 SHC4Q6S5L8 630 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 CCDC73Q6ZRK6 1079 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 GET4Q7L5D6 327 aaPredicted RBP19.3■□□□□ 0.68
PNKP-230ENST00000638016 ZNF720Q7Z2F6 126 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 GRASPQ7Z6J2 395 aaPredicted RBP19.3■□□□□ 0.68
PNKP-230ENST00000638016 ZSWIM2Q8NEG5 633 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 HDAC7Q8WUI4 952 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 PBXIP1Q96AQ6 731 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 ZDHHC7Q9NXF8 308 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 DAXXQ9UER7 740 aaPredicted RBP19.3■□□□□ 0.68
PNKP-230ENST00000638016 DPP7Q9UHL4 492 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 CPSF3Q9UKF6 684 aaKnown RBP19.3■□□□□ 0.68
PNKP-230ENST00000638016 SORCS3Q9UPU3 1222 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 KMT2EQ8IZD2 1858 aa19.3■□□□□ 0.68
PNKP-230ENST00000638016 RPL9P32969 192 aaKnown RBP19.29■□□□□ 0.68
PNKP-230ENST00000638016 ARPP19P56211 112 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 ROR1Q01973 937 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 MTMR3Q13615 1198 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 AXDND1Q5T1B0 1012 aaPredicted RBP19.29■□□□□ 0.68
PNKP-230ENST00000638016 LIN9Q5TKA1 542 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 JADE1Q6IE81 842 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 ELMSAN1Q6PJG2 1045 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 ANKS3Q6ZW76 656 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 OTOP3Q7RTS5 596 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 GLIS3Q8NEA6 775 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 HPS3Q969F9 1004 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 ACSF2Q96CM8 615 aaPredicted RBP19.29■□□□□ 0.68
PNKP-230ENST00000638016 ZNF396Q96N95 335 aaPredicted RBP19.29■□□□□ 0.68
PNKP-230ENST00000638016 STRA6Q9BX79 667 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 ST6GALNAC4Q9H4F1 302 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 MRPL44Q9H9J2 332 aaKnown RBP19.29■□□□□ 0.68
PNKP-230ENST00000638016 RPF1Q9H9Y2 349 aaKnown RBP19.29■□□□□ 0.68
PNKP-230ENST00000638016 PLEKHA5Q9HAU0 1116 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 HCFC1R1Q9NWW0 138 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 TIMM13Q9Y5L4 95 aaPredicted RBP19.29■□□□□ 0.68
PNKP-230ENST00000638016 BACE2Q9Y5Z0 518 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 SCN1AP35498 2009 aa19.29■□□□□ 0.68
PNKP-230ENST00000638016 WDR27A2RRH5 827 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 TRAPPC3O43617 180 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 PPP6R2O75170 966 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 ADSSP30520 456 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 VCPP55072 806 aaKnown RBP19.28■□□□□ 0.68
PNKP-230ENST00000638016 WNT7BP56706 349 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 E2F4Q16254 413 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 PPM1LQ5SGD2 360 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 ADALQ6DHV7 355 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 PDXDC1Q6P996 788 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 PLCD3Q8N3E9 789 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 DHX58Q96C10 678 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 FAM84AQ96KN4 292 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms