RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 POLIQ9UNA4 740 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 NUB1Q9Y5A7 615 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 H0Y858 1186 aa21.93■■□□□ 1.1
CLN6-222ENST00000637667 SYN3O14994 580 aa21.93■■□□□ 1.1
CLN6-222ENST00000637667 CFHP08603 1231 aa21.93■■□□□ 1.1
CLN6-222ENST00000637667 SRFP11831 508 aa21.93■■□□□ 1.1
CLN6-222ENST00000637667 PLCG1P19174 1290 aa21.93■■□□□ 1.1
CLN6-222ENST00000637667 PTPRZ1P23471 2315 aaPredicted RBP21.93■■□□□ 1.1
CLN6-222ENST00000637667 LONP1P36776 959 aaKnown RBP21.93■■□□□ 1.1
CLN6-222ENST00000637667 GRIN1Q05586 938 aa21.93■■□□□ 1.1
CLN6-222ENST00000637667 CUL4AQ13619 759 aa21.93■■□□□ 1.1
CLN6-222ENST00000637667 SF3A1Q15459 793 aaKnown RBP21.93■■□□□ 1.1
CLN6-222ENST00000637667 HAUS6Q7Z4H7 955 aa21.93■■□□□ 1.1
CLN6-222ENST00000637667 BLOC1S4Q9NUP1 217 aa21.93■■□□□ 1.1
CLN6-222ENST00000637667 CDH7Q9ULB5 785 aa21.93■■□□□ 1.1
CLN6-222ENST00000637667 RIF1Q5UIP0 2472 aaKnown RBP21.92■■□□□ 1.1
CLN6-222ENST00000637667 FAM13AO94988 1023 aa21.92■■□□□ 1.1
CLN6-222ENST00000637667 CLTAP09496 248 aa21.92■■□□□ 1.1
CLN6-222ENST00000637667 CXCL8P10145 99 aa21.92■■□□□ 1.1
CLN6-222ENST00000637667 AOC1P19801 751 aa21.92■■□□□ 1.1
CLN6-222ENST00000637667 MATR3P43243 847 aaKnown RBP eCLIP21.92■■□□□ 1.1
CLN6-222ENST00000637667 DHX8Q14562 1220 aaKnown RBP21.92■■□□□ 1.1
CLN6-222ENST00000637667 KARSQ15046 597 aaKnown RBP21.92■■□□□ 1.1
CLN6-222ENST00000637667 SLC8B1Q6J4K2 584 aa21.92■■□□□ 1.1
CLN6-222ENST00000637667 RASSF8Q8NHQ8 419 aa21.92■■□□□ 1.1
CLN6-222ENST00000637667 HAPLN2Q9GZV7 340 aa21.92■■□□□ 1.1
CLN6-222ENST00000637667 PLEKHA5Q9HAU0 1116 aa21.92■■□□□ 1.1
CLN6-222ENST00000637667 NUMBLQ9Y6R0 609 aa21.92■■□□□ 1.1
CLN6-222ENST00000637667 VPS37CA5D8V6 355 aaPredicted RBP21.91■■□□□ 1.1
CLN6-222ENST00000637667 ZNF131P52739 623 aa21.91■■□□□ 1.1
CLN6-222ENST00000637667 ROR1Q01973 937 aa21.91■■□□□ 1.1
CLN6-222ENST00000637667 MCM6Q14566 821 aa21.91■■□□□ 1.1
CLN6-222ENST00000637667 MYCT1Q8N699 235 aa21.91■■□□□ 1.1
CLN6-222ENST00000637667 ST13P5Q8NFI4 369 aaPredicted RBP21.91■■□□□ 1.1
CLN6-222ENST00000637667 ZNF461Q8TAF7 563 aa21.91■■□□□ 1.1
CLN6-222ENST00000637667 ITFG1Q8TB96 612 aa21.91■■□□□ 1.1
CLN6-222ENST00000637667 RAD54LQ92698 747 aa21.91■■□□□ 1.1
CLN6-222ENST00000637667 FGF13Q92913 245 aa21.91■■□□□ 1.1
CLN6-222ENST00000637667 SUSD3Q96L08 255 aa21.91■■□□□ 1.1
CLN6-222ENST00000637667 PARVGQ9HBI0 331 aa21.91■■□□□ 1.1
CLN6-222ENST00000637667 TUBGCP4Q9UGJ1 667 aa21.91■■□□□ 1.1
CLN6-222ENST00000637667 CITO14578 2027 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 KRBA1A5PL33 1030 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 H7C4K7 107 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 K7ENM7 598 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 PI15O43692 258 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 TBC1D4O60343 1298 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 PDCP20941 246 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 SCP2P22307 547 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 MCM4P33991 863 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 LIG4P49917 911 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 MRPL58Q14197 206 aaKnown RBP21.9■■□□□ 1.1
CLN6-222ENST00000637667 PABPC1LQ4VXU2 614 aaKnown RBP21.9■■□□□ 1.1
CLN6-222ENST00000637667 RTP3Q9BQQ7 232 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 HCFC1R1Q9NWW0 138 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 DNMT3BQ9UBC3 853 aaKnown RBP21.9■■□□□ 1.1
CLN6-222ENST00000637667 KCNH3Q9ULD8 1083 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 CA14Q9ULX7 337 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 TBX20Q9UMR3 447 aa21.9■■□□□ 1.1
CLN6-222ENST00000637667 MYH11P35749 1972 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 TTC26A0AVF1 554 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 HNRNPDLO14979 420 aaKnown RBP21.89■■□□□ 1.09
CLN6-222ENST00000637667 ABLIM3O94929 683 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 PIGRP01833 764 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 KRT18P05783 430 aaKnown RBP21.89■■□□□ 1.09
CLN6-222ENST00000637667 ELF1P32519 619 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 KYAT1Q16773 422 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 PARM1Q6UWI2 310 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 GPR152Q8TDT2 470 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 FGF14Q92915 247 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 KIF12Q96FN5 646 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 CCSER1Q9C0I3 900 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 SLC2A4RGQ9NR83 387 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 FBXL5Q9UKA1 691 aa21.89■■□□□ 1.09
CLN6-222ENST00000637667 ARHGEF37A1IGU5 675 aa21.88■■□□□ 1.09
CLN6-222ENST00000637667 WDR27A2RRH5 827 aa21.88■■□□□ 1.09
CLN6-222ENST00000637667 STK25O00506 426 aa21.88■■□□□ 1.09
CLN6-222ENST00000637667 PRRG1O14668 218 aa21.88■■□□□ 1.09
CLN6-222ENST00000637667 TBCAO75347 108 aaKnown RBP21.88■■□□□ 1.09
CLN6-222ENST00000637667 ARPP19P56211 112 aa21.88■■□□□ 1.09
CLN6-222ENST00000637667 SPAG1Q07617 926 aa21.88■■□□□ 1.09
CLN6-222ENST00000637667 CTXN3Q4LDR2 81 aa21.88■■□□□ 1.09
CLN6-222ENST00000637667 MTSS1LQ765P7 747 aa21.88■■□□□ 1.09
CLN6-222ENST00000637667 APPL2Q8NEU8 664 aa21.88■■□□□ 1.09
CLN6-222ENST00000637667 LARP4BQ92615 738 aaKnown RBP21.88■■□□□ 1.09
CLN6-222ENST00000637667 RPP25Q9BUL9 199 aaKnown RBP21.88■■□□□ 1.09
CLN6-222ENST00000637667 ZHX3Q9H4I2 956 aa21.88■■□□□ 1.09
CLN6-222ENST00000637667 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.88■■□□□ 1.09
CLN6-222ENST00000637667 CLIC4Q9Y696 253 aa21.88■■□□□ 1.09
CLN6-222ENST00000637667 TRAK2O60296 914 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 ATF2P15336 505 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 RFX1P22670 979 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 LRPAP1P30533 357 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 TNFSF9P41273 254 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 PPP2R3AQ06190 1150 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 PTPAQ15257 358 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 ZBTB6Q15916 424 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 ZBTB41Q5SVQ8 909 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 ZNF280DQ6N043 979 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 NPAS3Q8IXF0 933 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms