RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 MCRS1Q96EZ8 462 aa19.59■□□□□ 0.73
CIITA-215ENST00000637439 DRC1Q96MC2 740 aa19.59■□□□□ 0.73
CIITA-215ENST00000637439 C17orf75Q9HAS0 396 aa19.59■□□□□ 0.73
CIITA-215ENST00000637439 PTPRHQ9HD43 1115 aa19.59■□□□□ 0.73
CIITA-215ENST00000637439 LTB4R2Q9NPC1 389 aa19.59■□□□□ 0.73
CIITA-215ENST00000637439 MRPS17Q9Y2R5 130 aaKnown RBP19.59■□□□□ 0.73
CIITA-215ENST00000637439 CACNA1AO00555 2505 aa19.59■□□□□ 0.73
CIITA-215ENST00000637439 DMXL1Q9Y485 3027 aa19.58■□□□□ 0.73
CIITA-215ENST00000637439 PODXLO00592 558 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 ZNF197O14709 1029 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 SPTLC1O15269 473 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 MCF2P10911 925 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 ATF2P15336 505 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 KCNE1P15382 129 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 RPL9P32969 192 aaKnown RBP19.58■□□□□ 0.72
CIITA-215ENST00000637439 VARS2Q5ST30 1063 aaKnown RBP19.58■□□□□ 0.72
CIITA-215ENST00000637439 TCEAL8Q8IYN2 117 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 CEP120Q8N960 986 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 IGSF22Q8N9C0 903 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 FAM184AQ8NB25 1140 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 ELSPBP1Q96BH3 223 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 ACAP3Q96P50 834 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 TCHPQ9BT92 498 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 KMT5AQ9NQR1 393 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 PATJQ8NI35 1801 aa19.58■□□□□ 0.72
CIITA-215ENST00000637439 LAD1O00515 517 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 MICAL2O94851 1124 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 OSTNP61366 133 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 SOX4Q06945 474 aaPredicted RBP19.57■□□□□ 0.72
CIITA-215ENST00000637439 SLC5A9Q2M3M2 681 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 KRT79Q5XKE5 535 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 TPGS2Q68CL5 300 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 ZNF852Q6ZMS4 543 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 TPRG1Q6ZUI0 275 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 SUMF1Q8NBK3 374 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 DNASE1L2Q92874 299 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 CLDN23Q96B33 292 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 RMDN1Q96DB5 314 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 ZSCAN31Q96LW9 406 aaPredicted RBP19.57■□□□□ 0.72
CIITA-215ENST00000637439 ARHGAP28Q9P2N2 729 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 KCNG1Q9UIX4 513 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 MTF2Q9Y483 593 aaPredicted RBP19.57■□□□□ 0.72
CIITA-215ENST00000637439 NUB1Q9Y5A7 615 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 PCDHGA2Q9Y5H1 932 aa19.57■□□□□ 0.72
CIITA-215ENST00000637439 WDR27A2RRH5 827 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 TBC1D4O60343 1298 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 HIP1RO75146 1068 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 CD72P21854 359 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 RPS9P46781 194 aaKnown RBP19.56■□□□□ 0.72
CIITA-215ENST00000637439 PTGDRQ13258 359 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 PUM1Q14671 1186 aaKnown RBP eCLIP19.56■□□□□ 0.72
CIITA-215ENST00000637439 MPZL3Q6UWV2 235 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 ELMOD1Q8N336 334 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 ATRIPQ8WXE1 791 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 ZMAT2Q96NC0 199 aaKnown RBP19.56■□□□□ 0.72
CIITA-215ENST00000637439 TIPINQ9BVW5 301 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 TARS2Q9BW92 718 aaKnown RBP19.56■□□□□ 0.72
CIITA-215ENST00000637439 CYP4F11Q9HBI6 524 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 CNTN3Q9P232 1028 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 MAFFQ9ULX9 164 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 OTOGLQ3ZCN5 2332 aa19.56■□□□□ 0.72
CIITA-215ENST00000637439 E9PMD0 336 aa19.55■□□□□ 0.72
CIITA-215ENST00000637439 CITO14578 2027 aa19.55■□□□□ 0.72
CIITA-215ENST00000637439 CEBPBP17676 345 aa19.55■□□□□ 0.72
CIITA-215ENST00000637439 PROZP22891 400 aa19.55■□□□□ 0.72
CIITA-215ENST00000637439 U2AF2P26368 475 aaKnown RBP eCLIP19.55■□□□□ 0.72
CIITA-215ENST00000637439 ARPP19P56211 112 aa19.55■□□□□ 0.72
CIITA-215ENST00000637439 CSTF1Q05048 431 aaKnown RBP19.55■□□□□ 0.72
CIITA-215ENST00000637439 MRPL58Q14197 206 aaKnown RBP19.55■□□□□ 0.72
CIITA-215ENST00000637439 DGLUCYQ7Z3D6 616 aa19.55■□□□□ 0.72
CIITA-215ENST00000637439 DAW1Q8N136 415 aa19.55■□□□□ 0.72
CIITA-215ENST00000637439 CORO1BQ9BR76 489 aa19.55■□□□□ 0.72
CIITA-215ENST00000637439 PLA2G2FQ9BZM2 168 aa19.55■□□□□ 0.72
CIITA-215ENST00000637439 ZFP14Q9HCL3 533 aa19.55■□□□□ 0.72
CIITA-215ENST00000637439 SH2B1Q9NRF2 756 aaPredicted RBP19.55■□□□□ 0.72
CIITA-215ENST00000637439 MAN2B1O00754 1011 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 TARSP26639 723 aaKnown RBP19.54■□□□□ 0.72
CIITA-215ENST00000637439 PRPHP41219 470 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 ADCY1Q08828 1119 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 STRN3Q13033 797 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 NBR1Q14596 966 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 CTXN3Q4LDR2 81 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 PRSS36Q5K4E3 855 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 CYP4A22Q5TCH4 519 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 TANGO2Q6ICL3 276 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 IQCEQ6IPM2 695 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 ZNF280DQ6N043 979 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 RINT1Q6NUQ1 792 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 PDZD4Q76G19 769 aaPredicted RBP19.54■□□□□ 0.72
CIITA-215ENST00000637439 TAS1R3Q7RTX0 852 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 GPR161Q8N6U8 529 aaKnown RBP19.54■□□□□ 0.72
CIITA-215ENST00000637439 APPL2Q8NEU8 664 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 SUSD3Q96L08 255 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 NTPCRQ9BSD7 190 aaKnown RBP19.54■□□□□ 0.72
CIITA-215ENST00000637439 ZSCAN32Q9NX65 697 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 PPP4R2Q9NY27 417 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 FBXL5Q9UKA1 691 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 INSL5Q9Y5Q6 135 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 COL4A3Q01955 1670 aa19.54■□□□□ 0.72
CIITA-215ENST00000637439 ABLIM1O14639 778 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms