RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CAGE1Q8TC20 777 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 FAM212AQ96EL1 285 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 HTATIP2Q9BUP3 242 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 LUC7LQ9NQ29 371 aaKnown RBP16.53■□□□□ 0.24
CLN6-219ENST00000637329 RRAGDQ9NQL2 400 aaPredicted RBP16.53■□□□□ 0.24
CLN6-219ENST00000637329 TRMT13Q9NUP7 481 aaKnown RBP16.53■□□□□ 0.24
CLN6-219ENST00000637329 CNTN3Q9P232 1028 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.53■□□□□ 0.24
CLN6-219ENST00000637329 NR2E3Q9Y5X4 410 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 BRCA2P51587 3418 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 EVI5O60447 810 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 ASS1P00966 412 aaKnown RBP16.52■□□□□ 0.24
CLN6-219ENST00000637329 EIF4A3P38919 411 aaKnown RBP16.52■□□□□ 0.24
CLN6-219ENST00000637329 RAB27AP51159 221 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 NOP14P78316 857 aaKnown RBP16.52■□□□□ 0.24
CLN6-219ENST00000637329 TFAMQ00059 246 aaKnown RBP16.52■□□□□ 0.24
CLN6-219ENST00000637329 TMEM132DQ14C87 1099 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 SPA17Q15506 151 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 ASTE1Q2TB18 679 aaPredicted RBP16.52■□□□□ 0.24
CLN6-219ENST00000637329 UBXN11Q5T124 520 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 JADE1Q6IE81 842 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 HACE1Q8IYU2 909 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 DEFB118Q96PH6 123 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 DESI2Q9BSY9 194 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 TRAIPQ9BWF2 469 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 EIF2AQ9BY44 585 aaKnown RBP16.52■□□□□ 0.24
CLN6-219ENST00000637329 RNF208Q9H0X6 261 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 ITGA11Q9UKX5 1188 aa16.52■□□□□ 0.24
CLN6-219ENST00000637329 COL6A3P12111 3177 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 USP27XA6NNY8 438 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 MEFVO15553 781 aaPredicted RBP16.51■□□□□ 0.23
CLN6-219ENST00000637329 AKR1B10O60218 316 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 STAU1O95793 577 aaKnown RBP16.51■□□□□ 0.23
CLN6-219ENST00000637329 NFICP08651 508 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 CAPN2P17655 700 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 ATICP31939 592 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 CDK7P50613 346 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 PAK2Q13177 524 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 TRPC3Q13507 836 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 MTFR1Q15390 333 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 SLC18A3Q16572 532 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 SGSM1Q2NKQ1 1148 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 TWF2Q6IBS0 349 aaKnown RBP16.51■□□□□ 0.23
CLN6-219ENST00000637329 NYAP1Q6ZVC0 841 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 REXO1L1PQ8IX06 675 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 FAM71AQ8IYT1 594 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 KREMEN1Q96MU8 473 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 NIF3L1Q9GZT8 377 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 CRISPLD2Q9H0B8 497 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 NXF3Q9H4D5 531 aaKnown RBP16.51■□□□□ 0.23
CLN6-219ENST00000637329 FAM124BQ9H5Z6 455 aaPredicted RBP16.51■□□□□ 0.23
CLN6-219ENST00000637329 VRTNQ9H8Y1 702 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 ERVK-5Q9HDB9 667 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 ST3GAL5Q9UNP4 418 aa16.51■□□□□ 0.23
CLN6-219ENST00000637329 CITO14578 2027 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 A0A1W2PPC1 479 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 TULP1O00294 542 aaPredicted RBP16.5■□□□□ 0.23
CLN6-219ENST00000637329 XPOTO43592 962 aaKnown RBP16.5■□□□□ 0.23
CLN6-219ENST00000637329 RECQL4O94761 1208 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 PLEKP08567 350 aaPredicted RBP16.5■□□□□ 0.23
CLN6-219ENST00000637329 PTK2Q05397 1052 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 CUL2Q13617 745 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 BMS1Q14692 1282 aaKnown RBP16.5■□□□□ 0.23
CLN6-219ENST00000637329 ARHGAP44Q17R89 818 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 ZNF699Q32M78 642 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 XKR4Q5GH76 650 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 C10orf76Q5T2E6 689 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 ACRBPQ8NEB7 543 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 TSGA10Q9BZW7 698 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 HAUS4Q9H6D7 363 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 TRMT1Q9NXH9 659 aaKnown RBP16.5■□□□□ 0.23
CLN6-219ENST00000637329 SNTG2Q9NY99 539 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 IPPQ9Y573 584 aa16.5■□□□□ 0.23
CLN6-219ENST00000637329 PDCD11Q14690 1871 aaKnown RBP16.5■□□□□ 0.23
CLN6-219ENST00000637329 LRRN2O75325 713 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 OFD1O75665 1012 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 MYCP01106 439 aaPredicted RBP16.49■□□□□ 0.23
CLN6-219ENST00000637329 CKBP12277 381 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 KCNE1P15382 129 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 VAV2P52735 878 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 YWHAEP62258 255 aaKnown RBP16.49■□□□□ 0.23
CLN6-219ENST00000637329 ARID5AQ03989 594 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 BFSP2Q13515 415 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 LPIN1Q14693 890 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 PTPN14Q15678 1187 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 ZNF618Q5T7W0 954 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 ALKAL1Q6UXT8 129 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 FAM126BQ8IXS8 530 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 C1orf127Q8N9H9 656 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 KIF12Q96FN5 646 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 SYT11Q9BT88 431 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 PI4K2AQ9BTU6 479 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 TANC1Q9C0D5 1861 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 XYLT2Q9H1B5 865 aa16.49■□□□□ 0.23
CLN6-219ENST00000637329 REXO2Q9Y3B8 237 aaKnown RBP16.49■□□□□ 0.23
CLN6-219ENST00000637329 FOXN3O00409 490 aaPredicted RBP16.48■□□□□ 0.23
CLN6-219ENST00000637329 PITPNM1O00562 1244 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 TLR3O15455 904 aaKnown RBP16.48■□□□□ 0.23
CLN6-219ENST00000637329 GHRP10912 638 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 SKIP12755 728 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms