RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 NLRP12P59046 1061 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 TFAMQ00059 246 aaKnown RBP18.64■□□□□ 0.57
CLN6-218ENST00000637223 CYP24A1Q07973 514 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 PAK1Q13153 545 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 ADAM9Q13443 819 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 MYBPC2Q14324 1141 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 HSP90AA2PQ14568 343 aaPredicted RBP18.64■□□□□ 0.57
CLN6-218ENST00000637223 SKIV2LQ15477 1246 aaKnown RBP18.64■□□□□ 0.57
CLN6-218ENST00000637223 NFKBIBQ15653 356 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 ZBTB6Q15916 424 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 KLHL40Q2TBA0 621 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 EDRF1Q3B7T1 1238 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 DPCR1Q3MIW9 517 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 LMBRD2Q68DH5 695 aaPredicted RBP18.64■□□□□ 0.57
CLN6-218ENST00000637223 SPPL3Q8TCT6 385 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 HASPINQ8TF76 798 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 TMEM174Q8WUU8 243 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 POF1BQ8WVV4 589 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 CCDC127Q96BQ5 260 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 COLEC11Q9BWP8 271 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 FRMD4BQ9Y2L6 1034 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 DERAQ9Y315 318 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 C2CD2Q9Y426 696 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 CHD9Q3L8U1 2897 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 CARNS1A5YM72 827 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 PODXLO00592 558 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 XPOTO43592 962 aaKnown RBP18.63■□□□□ 0.57
CLN6-218ENST00000637223 AKAP3O75969 853 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 KIF4AO95239 1232 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 DLATP10515 647 aaKnown RBP18.63■□□□□ 0.57
CLN6-218ENST00000637223 IGFBP6P24592 240 aaPredicted RBP18.63■□□□□ 0.57
CLN6-218ENST00000637223 DNAJB1P25685 340 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 PLCB3Q01970 1234 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 KRT17Q04695 432 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 LRRC63Q05C16 580 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 SPATA1Q5VX52 437 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 MLKLQ8NB16 471 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 BEST2Q8NFU1 509 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 SYAP1Q96A49 352 aaPredicted RBP18.63■□□□□ 0.57
CLN6-218ENST00000637223 MFSD14AQ96MC6 490 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 UROC1Q96N76 676 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 TSPAN18Q96SJ8 248 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 KIAA1671Q9BY89 1806 aa18.63■□□□□ 0.57
CLN6-218ENST00000637223 CETN3O15182 167 aa18.62■□□□□ 0.57
CLN6-218ENST00000637223 TADA2AO75478 443 aa18.62■□□□□ 0.57
CLN6-218ENST00000637223 CYP3A5P20815 502 aa18.62■□□□□ 0.57
CLN6-218ENST00000637223 PSMD6Q15008 389 aa18.62■□□□□ 0.57
CLN6-218ENST00000637223 SURF1Q15526 300 aa18.62■□□□□ 0.57
CLN6-218ENST00000637223 UPP1Q16831 310 aa18.62■□□□□ 0.57
CLN6-218ENST00000637223 TMEM31Q5JXX7 168 aa18.62■□□□□ 0.57
CLN6-218ENST00000637223 TTI2Q6NXR4 508 aa18.62■□□□□ 0.57
CLN6-218ENST00000637223 PLEKHO2Q8TD55 490 aa18.62■□□□□ 0.57
CLN6-218ENST00000637223 FNBP1Q96RU3 617 aa18.62■□□□□ 0.57
CLN6-218ENST00000637223 POP1Q99575 1024 aaKnown RBP18.62■□□□□ 0.57
CLN6-218ENST00000637223 DUSP9Q99956 384 aaKnown RBP18.62■□□□□ 0.57
CLN6-218ENST00000637223 PTPRJQ12913 1337 aa18.62■□□□□ 0.57
CLN6-218ENST00000637223 BICDL2A1A5D9 508 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 B3GAT3O94766 335 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 RPL9P32969 192 aaKnown RBP18.61■□□□□ 0.57
CLN6-218ENST00000637223 PSMC2P35998 433 aaKnown RBP18.61■□□□□ 0.57
CLN6-218ENST00000637223 FKBP3Q00688 224 aaKnown RBP18.61■□□□□ 0.57
CLN6-218ENST00000637223 DCLRE1AQ6PJP8 1040 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 SASS6Q6UVJ0 657 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 NT5DC4Q86YG4 428 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 FAM186BQ8IYM0 893 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 C3orf58Q8NDZ4 430 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 OR5B17Q8NGF7 314 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 DDX27Q96GQ7 796 aaKnown RBP18.61■□□□□ 0.57
CLN6-218ENST00000637223 CGRRF1Q99675 332 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 VN1R3Q9BXE9 311 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 MTMR12Q9C0I1 747 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 GZF1Q9H116 711 aaPredicted RBP18.61■□□□□ 0.57
CLN6-218ENST00000637223 DPP3Q9NY33 737 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 PUF60Q9UHX1 559 aaKnown RBP18.61■□□□□ 0.57
CLN6-218ENST00000637223 ADAM28Q9UKQ2 775 aa18.61■□□□□ 0.57
CLN6-218ENST00000637223 PPEF2O14830 753 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 TMEM191BP0C7N4 346 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 TNNI1P19237 187 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 LRPAP1P30533 357 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 UBE3AQ05086 875 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 CAMK1Q14012 370 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 PTPROQ16827 1216 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 FUT10Q6P4F1 479 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 DDX53Q86TM3 631 aaKnown RBP18.6■□□□□ 0.57
CLN6-218ENST00000637223 WDR49Q8IV35 697 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 ZC3H3Q8IXZ2 948 aaKnown RBP18.6■□□□□ 0.57
CLN6-218ENST00000637223 CACTINQ8WUQ7 758 aaKnown RBP18.6■□□□□ 0.57
CLN6-218ENST00000637223 LMAN2LQ9H0V9 348 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 INTS13Q9NVM9 706 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 RWDD2AQ9UIY3 292 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 LZTS1Q9Y250 596 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 PCDHGC5Q9Y5F6 944 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.6■□□□□ 0.57
CLN6-218ENST00000637223 RALGAPA2Q2PPJ7 1873 aa18.6■□□□□ 0.57
CLN6-218ENST00000637223 LRRIQ3A6PVS8 624 aaPredicted RBP18.59■□□□□ 0.57
CLN6-218ENST00000637223 I3L4J1 428 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 EPB41P11171 864 aaKnown RBP18.59■□□□□ 0.57
CLN6-218ENST00000637223 IRS1P35568 1242 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 BRCC3P46736 316 aa18.59■□□□□ 0.57
CLN6-218ENST00000637223 ERVFC1P60507 584 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms