RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 CEP63Q96MT8 703 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 MRPL9Q9BYD2 267 aaKnown RBP16.79■□□□□ 0.28
CTSD-207ENST00000636571 THAP9Q9H5L6 903 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 ASB7Q9H672 318 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 MMRN2Q9H8L6 949 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 KANSL3Q9P2N6 904 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 MAGEC2Q9UBF1 373 aaPredicted RBP16.79■□□□□ 0.28
CTSD-207ENST00000636571 PRG3Q9Y2Y8 225 aaPredicted RBP16.79■□□□□ 0.28
CTSD-207ENST00000636571 PLXNA4Q9HCM2 1894 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 ITGB1P05556 798 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 OR1G1P47890 313 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 CLCNKBP51801 687 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 VAMP7P51809 220 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 BCAR1P56945 870 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 SMAD3P84022 425 aaKnown RBP16.79■□□□□ 0.28
CTSD-207ENST00000636571 FANCCQ00597 558 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 TUSC3Q13454 348 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 FILIP1Q7Z7B0 1213 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 C3orf58Q8NDZ4 430 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 CNOT6LQ96LI5 555 aaKnown RBP16.79■□□□□ 0.28
CTSD-207ENST00000636571 MSRAQ9UJ68 235 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 SLC16A3O15427 465 aaKnown RBP16.78■□□□□ 0.28
CTSD-207ENST00000636571 GALTP07902 379 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 TNNI1P19237 187 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 PPP3CAQ08209 521 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 BFSP1Q12934 665 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 PTPN21Q16825 1174 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 CCDC40Q4G0X9 1142 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 TCP11X2Q5H9J9 407 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 DCAF17Q5H9S7 520 aaPredicted RBP16.78■□□□□ 0.28
CTSD-207ENST00000636571 CD302Q8IX05 232 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 COLGALT1Q8NBJ5 622 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 CLP1Q92989 425 aaKnown RBP16.78■□□□□ 0.28
CTSD-207ENST00000636571 ELMO3Q96BJ8 720 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 TIFAQ96CG3 184 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 FAM193BQ96PV7 902 aaPredicted RBP16.78■□□□□ 0.28
CTSD-207ENST00000636571 FNBP1Q96RU3 617 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 CGRRF1Q99675 332 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 MKNK1Q9BUB5 465 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 TRIM5Q9C035 493 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 TAB2Q9NYJ8 693 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 TRANK1O15050 2925 aa16.78■□□□□ 0.28
CTSD-207ENST00000636571 EYSQ5T1H1 3165 aa16.77■□□□□ 0.28
CTSD-207ENST00000636571 NRP1O14786 923 aa16.77■□□□□ 0.28
CTSD-207ENST00000636571 MAPK13O15264 365 aa16.77■□□□□ 0.28
CTSD-207ENST00000636571 FGFR1OPO95684 399 aaKnown RBP16.77■□□□□ 0.28
CTSD-207ENST00000636571 DEKP35659 375 aaKnown RBP16.77■□□□□ 0.28
CTSD-207ENST00000636571 POU5F1Q01860 360 aaKnown RBP16.77■□□□□ 0.28
CTSD-207ENST00000636571 RAB30Q15771 203 aa16.77■□□□□ 0.28
CTSD-207ENST00000636571 PPP2R2DQ66LE6 453 aa16.77■□□□□ 0.28
CTSD-207ENST00000636571 KCNT2Q6UVM3 1135 aa16.77■□□□□ 0.28
CTSD-207ENST00000636571 INTS8Q75QN2 995 aaKnown RBP16.77■□□□□ 0.28
CTSD-207ENST00000636571 C1orf127Q8N9H9 656 aa16.77■□□□□ 0.28
CTSD-207ENST00000636571 INTS13Q9NVM9 706 aa16.77■□□□□ 0.28
CTSD-207ENST00000636571 IFNKQ9P0W0 207 aa16.77■□□□□ 0.28
CTSD-207ENST00000636571 ARMCX3Q9UH62 379 aaPredicted RBP16.77■□□□□ 0.28
CTSD-207ENST00000636571 UBQLN1Q9UMX0 589 aaKnown RBP16.77■□□□□ 0.28
CTSD-207ENST00000636571 C2CD2Q9Y426 696 aa16.77■□□□□ 0.28
CTSD-207ENST00000636571 REV3LO60673 3130 aa16.77■□□□□ 0.28
CTSD-207ENST00000636571 EPOPA6NHQ4 379 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 CSPG5O95196 566 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 KIF4AO95239 1232 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 ADCY5O95622 1261 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 KRT13P13646 458 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 CTNNB1P35222 781 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.27
CTSD-207ENST00000636571 GCLMP48507 274 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 KRT31Q15323 416 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 TCERG1LQ5VWI1 586 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 WDR49Q8IV35 697 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 CXorf38Q8TB03 319 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 NAP1L5Q96NT1 182 aaPredicted RBP16.77■□□□□ 0.27
CTSD-207ENST00000636571 VPS16Q9H269 839 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 MARCH5Q9NX47 278 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 DPP3Q9NY33 737 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 SIX4Q9UIU6 781 aa16.77■□□□□ 0.27
CTSD-207ENST00000636571 LRRN2O75325 713 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 ITGB3P05106 788 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 TMEM191BP0C7N4 346 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 CLDN10P78369 228 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 UPP1Q16831 310 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 EPC2Q52LR7 807 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 TDRD10Q5VZ19 366 aaKnown RBP16.76■□□□□ 0.27
CTSD-207ENST00000636571 CD300LGQ6UXG3 332 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 TMC2Q8TDI7 906 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 SLC28A3Q9HAS3 691 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 SLC38A7Q9NVC3 462 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 DERAQ9Y315 318 aa16.76■□□□□ 0.27
CTSD-207ENST00000636571 I3L4J1 428 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 RFXAPO00287 272 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 PES1O00541 588 aaKnown RBP16.75■□□□□ 0.27
CTSD-207ENST00000636571 PODXLO00592 558 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 CST3P01034 146 aaPredicted RBP16.75■□□□□ 0.27
CTSD-207ENST00000636571 PRKCSHP14314 528 aaPredicted RBP16.75■□□□□ 0.27
CTSD-207ENST00000636571 UBASH3AP57075 661 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 CBWD6Q4V339 395 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 CBWD3Q5JTY5 395 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 CBWD5Q5RIA9 395 aa16.75■□□□□ 0.27
CTSD-207ENST00000636571 TRAPPC11Q7Z392 1133 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms