RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 BRIP1Q9BX63 1249 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 CYP26B1Q9NR63 512 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 LARGE1O95461 756 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 NUDT14O95848 222 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 APRTP07741 180 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 POM121L1PQ3SYA9 428 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 AGBL1Q96MI9 1066 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 MCEEQ96PE7 176 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 CIPCQ9C0C6 399 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 RASSF10A6NK89 507 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 FYNP06241 537 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 HPGDP15428 266 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 QARSP47897 775 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 ARHGAP17Q68EM7 881 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 UXS1Q8NBZ7 420 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 RAD54LQ92698 747 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 EML4Q9HC35 981 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 C20orf96Q9NUD7 363 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 PPP6R2O75170 966 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 WEE2P0C1S8 567 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 NR1D1P20393 614 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 HSD17B4P51659 736 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 KCNB1Q14721 858 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 LEMD2Q8NC56 503 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 ZNF556Q9HAH1 456 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 JPH1Q9HDC5 661 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 BSDC1Q9NW68 430 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 DONSONQ9NYP3 566 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 SH3BGRLO75368 114 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 RBM6P78332 1123 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 SNAPC2Q13487 334 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 SHROOM1Q2M3G4 852 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 MIIPQ5JXC2 388 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 DDX42Q86XP3 938 aaKnown RBP eCLIP18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 ST13P4Q8IZP2 240 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 GALNT4Q8N4A0 578 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 MOV10L1Q9BXT6 1211 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 CD209Q9NNX6 404 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 FEN1P39748 380 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 GOLGA7BQ2TAP0 167 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 SPATS2Q86XZ4 545 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 PAWRQ96IZ0 340 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 FBXO40Q9UH90 709 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 MINPP1Q9UNW1 487 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 NCAM1P13591 858 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 KCNH2Q12809 1159 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 TMEM132DQ14C87 1099 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 PDXDC1Q6P996 788 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 SHCBP1Q8NEM2 672 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 PTPRN2Q92932 1015 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 SNX8Q9Y5X2 465 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 TRAPPC3O43617 180 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 CALB1P05937 261 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 ENO2P09104 434 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 AKAP5P24588 427 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 NFRKBQ6P4R8 1299 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 FAM81BQ96LP2 452 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 IP6K2Q9UHH9 426 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 ANGPT2O15123 496 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 TSC22D2O75157 780 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 NDUFA10O95299 355 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 GUCY2CP25092 1073 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 EFCAB12Q6NXP0 572 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 C16orf62Q7Z3J2 963 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 FBXO18Q8NFZ0 1043 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 PI4K2AQ9BTU6 479 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 RNPEPQ9H4A4 650 aa18.74■□□□□ 0.59
CACNA1A-227ENST00000636549 HMGB1P1B2RPK0 211 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 AKAP10O43572 662 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 SYNCRIPO60506 623 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 KIF23Q02241 960 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 RCSD1Q6JBY9 416 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 ADCK1Q86TW2 530 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 KIAA2013Q8IYS2 634 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 C2orf40Q9H1Z8 148 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 TASP1Q9H6P5 420 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 F5H6K3 240 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 BRAFP15056 766 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 KLRC3Q07444 240 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 ARID5BQ14865 1188 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 GALNTL6Q49A17 601 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 CLIP3Q96DZ5 547 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 GIMAP4Q9NUV9 329 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 PIK3C2GO75747 1445 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 AATKQ6ZMQ8 1374 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 TEX33O43247 280 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 TSPAN3O60637 253 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 GUCA1AP43080 201 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 THAP9Q9H5L6 903 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 ECT2Q9H8V3 914 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 IQCMA0A1B0GVH7 501 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 ALOX15P16050 662 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 ASAP3Q8TDY4 903 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 MIR1-1HGQ9H1L0 117 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 HDAC6Q9UBN7 1215 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 CDC23Q9UJX2 597 aa18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 MAGOHP61326 146 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-227ENST00000636549 BAATQ14032 418 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms