RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ECE2O60344 883 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 NDUFS3O75489 264 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 CASP8Q14790 479 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 KRT24Q2M2I5 525 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 P3H1Q32P28 736 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 CCDC153Q494R4 210 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 SPANXN2Q5MJ10 180 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 ATP8B4Q8TF62 1192 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 C1QTNF7Q9BXJ2 289 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 HDHD2Q9H0R4 259 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 SPASTQ9UBP0 616 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 NXF1Q9UBU9 619 aaKnown RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 RSL24D1Q9UHA3 163 aaKnown RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 RPRD2Q5VT52 1461 aaKnown RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 MYH1P12882 1939 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 MYH4Q9Y623 1939 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 LDOC1O95751 146 aaPredicted RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 ACADMP11310 421 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 NR2F2P24468 414 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 MLH1P40692 756 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 SLFN5Q08AF3 891 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 MTX1Q13505 466 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 PKN1Q16512 942 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 DNAL1Q4LDG9 190 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 RHOT2Q8IXI1 618 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 RIN2Q8WYP3 895 aaPredicted RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 EFHD2Q96C19 240 aaPredicted RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 RBM7Q9Y580 266 aaKnown RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 SPTBP11277 2137 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 A8MXQ7 604 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 PDE8AO60658 829 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 MEA1Q16626 185 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 GATAD2BQ8WXI9 593 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 DCAF5Q96JK2 942 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 BFARQ9NZS9 450 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 DMTF1Q9Y222 760 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 SH3BP1Q9Y3L3 701 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 ABCC12Q96J65 1359 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 F8W810 466 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 PRRG1O14668 218 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 CBFA2T3O75081 653 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 IFNGR2P38484 337 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 TFDP2Q14188 446 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 LRRC24Q50LG9 513 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 CCNYL1Q8N7R7 359 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 AHCYL2Q96HN2 611 aaKnown RBP6.29□□□□□ -1.4
SCN1A-212ENST00000636194 FAR2Q96K12 515 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 UNKQ9C0B0 810 aaKnown RBP6.29□□□□□ -1.4
SCN1A-212ENST00000636194 DPP7Q9UHL4 492 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 BCS1LQ9Y276 419 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 DOPEY2Q9Y3R5 2298 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 PCM1Q15154 2024 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 PTPN23Q9H3S7 1636 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 E9PBE3 544 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 EPB42P16452 691 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
SCN1A-212ENST00000636194 RPS6KB1P23443 525 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 MAPK1P28482 360 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 HSPA13P48723 471 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 JAK3P52333 1124 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 POLR2FP61218 127 aaKnown RBP6.29□□□□□ -1.4
SCN1A-212ENST00000636194 CYP4A11Q02928 519 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 MPP2Q14168 576 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 TSNQ15631 228 aaKnown RBP6.29□□□□□ -1.4
SCN1A-212ENST00000636194 TTLL9Q3SXZ7 439 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 ZNF667Q5HYK9 610 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 CYP4A22Q5TCH4 519 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 HIPK4Q8NE63 616 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 LINS1Q8NG48 757 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 TGFBRAP1Q8WUH2 860 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 LNPEPQ9UIQ6 1025 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 SLC39A10Q9ULF5 831 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 KLHL20Q9Y2M5 609 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 KBTBD13C9JR72 458 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 BUB1O43683 1085 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 HS6ST1O60243 411 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 TTLL1O95922 423 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 RXRAP19793 462 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 PAX3P23760 479 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 PDIA3P30101 505 aaKnown RBP6.29□□□□□ -1.4
SCN1A-212ENST00000636194 CSNK2BP67870 215 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 TOMM20Q15388 145 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 ZNF699Q32M78 642 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 WLSQ5T9L3 541 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 TMC4Q7Z404 712 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 RCOR2Q8IZ40 523 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 CCDC54Q8NEL0 328 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 SPATA18Q8TC71 538 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 CAPSLQ8WWF8 208 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 BTBD3Q9Y2F9 522 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 A0A088AWK7 358 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 VGLL3A8MV65 326 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 B4E1Z4 1266 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 ZNF10P21506 573 aaPredicted RBP6.29□□□□□ -1.4
SCN1A-212ENST00000636194 PSMD4P55036 377 aaKnown RBP6.29□□□□□ -1.4
SCN1A-212ENST00000636194 SSTP61278 116 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 LGALS3BPQ08380 585 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 PDIA6Q15084 440 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 PDXDC2PQ6P474 469 aa6.29□□□□□ -1.4
SCN1A-212ENST00000636194 RPTNQ6XPR3 784 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms