RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	TBC1D25	Q3MII6	688 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	XKR9	Q5GH70	373 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	DPY19L2P1	Q6NXN4	242 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	MTHFD1L	Q6UB35	978 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	GALNT15	Q8N3T1	639 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ACTRT1	Q8TDG2	376 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	SPATA33	Q96N06	139 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	GPR20	Q99678	358 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	PARVG	Q9HBI0	331 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	VTA1	Q9NP79	307 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ZNF302	Q9NR11	478 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	SMARCAL1	Q9NZC9	954 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	EHD2	Q9NZN4	543 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	CNOT8	Q9UFF9	292 aa	Known RBP	11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	NAGPA	Q9UK23	515 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	L3MBTL1	Q9Y468	752 aa		11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.44	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	LCT	P09848	1927 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	IGKV6D-21	A0A0A0MT36	114 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	RBM47	A0AV96	593 aa	Known RBP	11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ESYT3	A0FGR9	886 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	AKAP3	O75969	853 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	WFS1	O76024	890 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	NPTXR	O95502	500 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	HOXC6	P09630	235 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	CXCR5	P32302	372 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	TCF7	P36402	384 aa	Predicted RBP	11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	PTK2	Q05397	1052 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ACVR2B	Q13705	512 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ALCAM	Q13740	583 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	UAP1	Q16222	522 aa	Predicted RBP	11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	PPP2R5E	Q16537	467 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ALKBH5	Q6P6C2	394 aa	Known RBP	11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	HS2ST1	Q7LGA3	356 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	USP38	Q8NB14	1042 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	SLC35C1	Q96A29	364 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ANKEF1	Q9NU02	776 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	TMEM59L	Q9UK28	342 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	PCDHB13	Q9Y5F0	798 aa		11.43	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	CAND2	O75155	1236 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	VIM	P08670	466 aa	Known RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	H2AFZ	P0C0S5	128 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	CNGA1	P29973	690 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	PSMC4	P43686	418 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	VEGFB	P49765	207 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	CASP5	P51878	434 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	EIF3B	P55884	814 aa	Known RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	JAM2	P57087	298 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	PRKCE	Q02156	737 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	H2AFV	Q71UI9	128 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	OTUD6A	Q7L8S5	288 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	TRPM8	Q7Z2W7	1104 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	DAW1	Q8N136	415 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	MYCT1	Q8N699	235 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	GBP7	Q8N8V2	638 aa	Predicted RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	KLHL23	Q8NBE8	558 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	TMEM174	Q8WUU8	243 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	TLCD1	Q96CP7	247 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	CEP170P1	Q96L14	293 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	PLCD4	Q9BRC7	762 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	NENF	Q9UMX5	172 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	TULP1	O00294	542 aa	Predicted RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	NOP56	O00567	594 aa	Known RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	NCK2	O43639	380 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	DKC1	O60832	514 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	HIP1R	O75146	1068 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	TRPA1	O75762	1119 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	KIF4A	O95239	1232 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	MAPT	P10636	758 aa	Known RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	SLC9A1	P19634	815 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ECHS1	P30084	290 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	HOXD13	P35453	343 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	STAT5B	P51692	787 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	MRPS35	P82673	323 aa	Known RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	CAP1	Q01518	475 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ARHGAP1	Q07960	439 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	MAPK7	Q13164	816 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	SNX1	Q13596	522 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	LBR	Q14739	615 aa	Known RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	SGSM1	Q2NKQ1	1148 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	XKR3	Q5GH77	459 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	TCERG1L	Q5VWI1	586 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	SLC9A9	Q8IVB4	645 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	FAM186B	Q8IYM0	893 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	KRT12	Q99456	494 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	STK33	Q9BYT3	514 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	ABHD16B	Q9H3Z7	469 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	CCDC134	Q9H6E4	229 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	NOVA2	Q9UNW9	492 aa	Known RBP	11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	FRMD4B	Q9Y2L6	1034 aa		11.42	□□□□□ -0.58
ARHGEF9-223	ENST00000636102	IGSF9B	Q9UPX0	1349 aa		11.41	□□□□□ -0.58
ARHGEF9-223	ENST00000636102		E7ENQ6	273 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms