RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 CMTM5Q96DZ9 223 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 HPS5Q9UPZ3 1129 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 ATP8B3O60423 1300 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 TYW5A2RUC4 315 aaKnown RBP12.28□□□□□ -0.44
COL11A1-211ENST00000635193 STRNO43815 780 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 STX3Q13277 289 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 COL23A1Q86Y22 540 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-211ENST00000635193 ZNF555Q8NEP9 628 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 GOLPH3Q9H4A6 298 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 MARCOQ9UEW3 520 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-211ENST00000635193 BCS1LQ9Y276 419 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 PLEKP08567 350 aaPredicted RBP12.27□□□□□ -0.44
COL11A1-211ENST00000635193 ENO3P13929 434 aaPredicted RBP12.27□□□□□ -0.44
COL11A1-211ENST00000635193 COMTP21964 271 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 SFNP31947 248 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 NSUN2Q08J23 767 aaKnown RBP eCLIP12.27□□□□□ -0.44
COL11A1-211ENST00000635193 FAM102AQ5T9C2 384 aaPredicted RBP12.27□□□□□ -0.44
COL11A1-211ENST00000635193 ANGPTL8Q6UXH0 198 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 KRT27Q7Z3Y8 459 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 OPTNQ96CV9 577 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 MTRQ99707 1265 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 ZNF341Q9BYN7 854 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 FOXP3Q9BZS1 431 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 DCLRE1BQ9H816 532 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 ANKZF1Q9H8Y5 726 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 MAGEA4P43358 317 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 ADRM1Q16186 407 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 PAPD7Q5XG87 772 aaKnown RBP12.27□□□□□ -0.44
COL11A1-211ENST00000635193 MFN1Q8IWA4 741 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 KLHL25Q9H0H3 589 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 CAAP1Q9H8G2 361 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 TUFT1Q9NNX1 390 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 DTNAQ9Y4J8 743 aa12.27□□□□□ -0.44
COL11A1-211ENST00000635193 DYTNA2CJ06 578 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 SNX2O60749 519 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 FAM200BP0CF97 657 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 ITGA8P53708 1063 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 ZNF568Q3ZCX4 644 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 RIBC1Q8N443 379 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-211ENST00000635193 CELF1Q92879 486 aaKnown RBP12.27□□□□□ -0.45
COL11A1-211ENST00000635193 CNBD2Q96M20 576 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 REEP2Q9BRK0 252 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 ASPSCR1Q9BZE9 553 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 OSBPL8Q9BZF1 889 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 FAM8A1Q9UBU6 413 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 ALG6Q9Y672 507 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 A0A0G2JLW4 131 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 TPP2P29144 1249 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-211ENST00000635193 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-211ENST00000635193 PTPAQ15257 358 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 C12orf60Q5U649 245 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 LVRNQ6Q4G3 990 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 CYFIP1Q7L576 1253 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 NMD3Q96D46 503 aaKnown RBP12.27□□□□□ -0.45
COL11A1-211ENST00000635193 TMA16Q96EY4 203 aaKnown RBP12.27□□□□□ -0.45
COL11A1-211ENST00000635193 TMEM117Q9H0C3 514 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 TMBIM4Q9HC24 238 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 RBAKQ9NYW8 714 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-211ENST00000635193 PLAGL2Q9UPG8 496 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 IQSEC2Q5JU85 1478 aa12.27□□□□□ -0.45
COL11A1-211ENST00000635193 PSMC5P62195 406 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 FASTKD1Q53R41 847 aaKnown RBP12.26□□□□□ -0.45
COL11A1-211ENST00000635193 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.26□□□□□ -0.45
COL11A1-211ENST00000635193 MAML3Q96JK9 1138 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 CD209Q9NNX6 404 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 RGL1Q9NZL6 768 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 APOL1O14791 398 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 PRLRP16471 622 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 BAG6P46379 1132 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 CPA2P48052 419 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 TSPY1Q01534 308 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 TNFAIP2Q03169 654 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 EPHA7Q15375 998 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 FRA10AC1Q70Z53 315 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 HORMAD1Q86X24 394 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 CPA5Q8WXQ8 436 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 SH3GL1Q99961 368 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 AP4S1Q9Y587 144 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 UNC13BO14795 1591 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 PLEKHG2Q9H7P9 1386 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 ZNF335Q9H4Z2 1342 aaPredicted RBP12.26□□□□□ -0.45
COL11A1-211ENST00000635193 PJA2O43164 708 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
COL11A1-211ENST00000635193 CRKP46108 304 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 KCNJ1P48048 391 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 PRPF39Q86UA1 669 aaKnown RBP12.26□□□□□ -0.45
COL11A1-211ENST00000635193 ATXN7L3BQ96GX2 97 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 SERPINB12Q96P63 405 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 SENP7Q9BQF6 1050 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 POLR3FQ9H1D9 316 aaPredicted RBP12.26□□□□□ -0.45
COL11A1-211ENST00000635193 PABPC3Q9H361 631 aaKnown RBP12.26□□□□□ -0.45
COL11A1-211ENST00000635193 DHX35Q9H5Z1 703 aaKnown RBP12.26□□□□□ -0.45
COL11A1-211ENST00000635193 HSPBP1Q9NZL4 362 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 FEM1BQ9UK73 627 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 SPHKAPQ2M3C7 1700 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 FAM196BA6NMK8 535 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 CACNA2D1P54289 1103 aa12.26□□□□□ -0.45
COL11A1-211ENST00000635193 VCPP55072 806 aaKnown RBP12.26□□□□□ -0.45
COL11A1-211ENST00000635193 ZNF200P98182 395 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms