RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 APEX1P27695 318 aaKnown RBP3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 TAP1Q03518 808 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 PAK1Q13153 545 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 MAPK7Q13164 816 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 TTF1Q15361 905 aaPredicted RBP3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 NFE2Q16621 373 aaPredicted RBP3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 CATSPEREQ5SY80 951 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 PIK3R6Q5UE93 754 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 MTDHQ86UE4 582 aaKnown RBP3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 SPATS2Q86XZ4 545 aaKnown RBP3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 WDR48Q8TAF3 677 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 ST8SIA2Q92186 375 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 GCDHQ92947 438 aaPredicted RBP3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 USP7Q93009 1102 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 LPPQ93052 612 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 FBXW5Q969U6 566 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 ORAI2Q96SN7 254 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 ASPSCR1Q9BZE9 553 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 KCNH6Q9H252 994 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.27□□□□□ -1.892e-8■■□□□ 13.5
SMARCB1-208ENST00000634926 GEMIN8Q9NWZ8 242 aaKnown RBP3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 DENND2AQ9ULE3 1009 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 CASZ1Q86V15 1759 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 LRRC37A3O60309 1634 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 PCNTO95613 3336 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 SPATA31A3Q5VYP0 1347 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 CBX4O00257 560 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 SCDO00767 359 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 NEMP1O14524 444 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 MFAP3LO75121 409 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 GLRX3O76003 335 aaKnown RBP3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 F2P00734 622 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 ABCG1P45844 678 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 USP14P54578 494 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 DSG1Q02413 1049 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 MTMR1Q13613 665 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 MEX3CQ5U5Q3 659 aaKnown RBP3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 LHFPL2Q6ZUX7 228 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 C16orf59Q7L2K0 433 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 HDGFL2Q7Z4V5 671 aaPredicted RBP3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 RTN4RL1Q86UN2 441 aaPredicted RBP3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 ARHGEF19Q8IW93 802 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 RAVER1Q8IY67 606 aaKnown RBP3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 HIPK4Q8NE63 616 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 SUPT20HQ8NEM7 779 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 C8orf48Q96LL4 319 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 BRIP1Q9BX63 1249 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 PCGF6Q9BYE7 350 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 CELF4Q9BZC1 486 aaKnown RBP3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 B4GALT6Q9UBX8 382 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 TRPC5Q9UL62 973 aaPredicted RBP3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 APOBEC2Q9Y235 224 aaKnown RBP3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 SPEF1Q9Y4P9 236 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 TRPM1Q7Z4N2 1603 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 SBF2Q86WG5 1849 aa3.26□□□□□ -1.89
SMARCB1-208ENST00000634926 COL18A1P39060 1754 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 SLIT3O75094 1523 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 COL24A1Q17RW2 1714 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 PIK3C2AO00443 1686 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 QRICH2Q9H0J4 1663 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 K7ESF4 209 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 M0R2C6 588 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 GSTA4O15217 222 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 GAS7O60861 476 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 H2AFYO75367 372 aaKnown RBP3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 NCR1O76036 304 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 ONECUT2O95948 504 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 VSIG10L2P0DP72 767 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 APOBEC3AP31941 199 aaPredicted RBP3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 LSSP48449 732 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 MECP2P51608 486 aaKnown RBP3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 NEK2P51955 445 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 MCL1Q07820 350 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 ITKQ08881 620 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 FAPQ12884 760 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 SART3Q15020 963 aaKnown RBP3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 GAGE13Q4V321 117 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 FAM47CQ5HY64 1035 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 OVCH1Q7RTY7 1134 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 IGSF22Q8N9C0 903 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 PLA2G15Q8NCC3 412 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 SMC1BQ8NDV3 1235 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 SMG7Q92540 1137 aaKnown RBP3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 SPATA5L1Q9BVQ7 753 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 CABP5Q9NP86 173 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 SAE1Q9UBE0 346 aaPredicted RBP3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 RCAN3Q9UKA8 241 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 COQ6Q9Y2Z9 468 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 PAPPAQ13219 1627 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 ARHGEF10O15013 1369 aa3.25□□□□□ -1.89
SMARCB1-208ENST00000634926 ABCC6O95255 1503 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 E2F8A0AVK6 867 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 CCDC66A2RUB6 948 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 LRRC3CA6NJW4 275 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 ZNF891A8MT65 544 aaPredicted RBP3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 LEFTY2O00292 366 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 MGST3O14880 152 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 TRIM24O15164 1050 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 FOXP2O15409 715 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms