RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 UBA6A0AVT1 1052 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 PKN2Q16513 984 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 LRRC24Q50LG9 513 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 OSBPL9Q96SU4 736 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 BIRC5O15392 142 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 CYTH3O43739 400 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 KRT76Q01546 638 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 PDIA2Q13087 525 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 KNL1Q8NG31 2342 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 CUL3Q13618 768 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 SHROOM1Q2M3G4 852 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 APPL1Q9UKG1 709 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 STAT3P40763 770 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 PTH1RQ03431 593 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 TXNRD1Q16881 649 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 FAM102AQ5T9C2 384 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 GDF11O95390 407 aa13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 UBXN2AP68543 259 aa13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 ADCK5Q3MIX3 580 aa13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 POLR3FQ9H1D9 316 aaPredicted RBP13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 PLEKHA5Q9HAU0 1116 aa13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZNF302Q9NR11 478 aa13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 SRP68Q9UHB9 627 aaKnown RBP13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 SOX13Q9UN79 622 aa13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 ALDH18A1P54886 795 aaKnown RBP13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 BFSP2Q13515 415 aa13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 TNIP3Q96KP6 325 aa13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 ARHGEF38Q9NXL2 777 aa13.83□□□□□ -0.19
SYNGAP1-208ENST00000629380 USP17L5A8MUK1 530 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 RNF103O00237 685 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 MTRF1O75570 445 aaKnown RBP13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 RCAN1P53805 252 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 KCNV1Q6PIU1 500 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 SP8Q8IXZ3 490 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 HINFPQ9BQA5 517 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 SPACA6W5XKT8 324 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 CCDC88AQ3V6T2 1871 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 KIAA0391O15091 583 aaKnown RBP13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 SLC26A4O43511 780 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 SFSWAPQ12872 951 aaKnown RBP13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 TBC1D10BQ4KMP7 808 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 FAM182BQ5T319 152 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 HACL1Q9UJ83 578 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 AKAP10O43572 662 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 IRX1P78414 480 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 CCDC60Q8IWA6 550 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 AGGF1Q8N302 714 aaeCLIP13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 PIGSQ96S52 555 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 DTNAQ9Y4J8 743 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 WDR19Q8NEZ3 1342 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 LIFRP42702 1097 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 WLSQ5T9L3 541 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 DPP10Q8N608 796 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 WDR48Q8TAF3 677 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 PGBD4Q96DM1 585 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 KCNK16Q96T55 309 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 RMDN3Q96TC7 470 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 ERAP1Q9NZ08 941 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 UBN2Q6ZU65 1347 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 NLRP14Q86W24 1093 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 SLC13A1Q9BZW2 595 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 SYBUQ9NX95 663 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 STK36Q9NRP7 1315 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 SERPINB9P50453 376 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 NME3Q13232 169 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 BTBD8Q5XKL5 378 aa13.83□□□□□ -0.2
SYNGAP1-208ENST00000629380 ST8SIA6P61647 398 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 STAT4Q14765 748 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 MTFR1Q15390 333 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 DOLKQ9UPQ8 538 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 CHMP2BQ9UQN3 213 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 DYRK3O43781 588 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 BRD2P25440 801 aaKnown RBP13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 CENPAP49450 140 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 EFNA5P52803 228 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 LRRC41Q15345 812 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 E2F4Q16254 413 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 C11orf57Q6ZUT1 292 aaPredicted RBP13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 NLRP9Q7RTR0 991 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 HSPBP1Q9NZL4 362 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 ZBTB5O15062 677 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 STKLD1Q8NE28 680 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 PSMC3IPQ9P2W1 217 aaPredicted RBP13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 ZMYND8Q9ULU4 1186 aaPredicted RBP13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 SRP72O76094 671 aaKnown RBP13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 SREBF2Q12772 1141 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 FOXP3Q9BZS1 431 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 TRABDQ9H4I3 376 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 DNAJC12Q9UKB3 198 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 C3orf70A6NLC5 250 aaPredicted RBP13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 KLHL2O95198 593 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 KBTBD12Q3ZCT8 623 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 ANKS6Q68DC2 871 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 RIC8BQ9NVN3 520 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 ABCB11O95342 1321 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 BARGINQ6ZT62 677 aa13.82□□□□□ -0.2
SYNGAP1-208ENST00000629380 MORC2Q9Y6X9 1032 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms