RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-217	ENST00000629136	STAT6	P42226	847 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	SPAG1	Q07617	926 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	SIGLEC14	Q08ET2	396 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	PKP1	Q13835	747 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	ENOX2	Q16206	610 aa	Known RBP	11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	PDXDC1	Q6P996	788 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	ELMSAN1	Q6PJG2	1045 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	TRIM67	Q6ZTA4	783 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	ZDHHC14	Q8IZN3	488 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	KREMEN2	Q8NCW0	462 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	ASIC4	Q96FT7	647 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	STRA6	Q9BX79	667 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	IKZF4	Q9H2S9	585 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	SMOC2	Q9H3U7	446 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	ZDHHC7	Q9NXF8	308 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	CPSF3	Q9UKF6	684 aa	Known RBP	11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	SORCS3	Q9UPU3	1222 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	CDY1	Q9Y6F8	540 aa		11.75	□□□□□ -0.53
CHD2-217	ENST00000629136	TRAPPC3	O43617	180 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	ZMYND10	O75800	440 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	YEATS4	O95619	227 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	ASGR2	P07307	311 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	ADRB2	P07550	413 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	ZSCAN22	P10073	491 aa	Predicted RBP	11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	ABCD1	P33897	745 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	OR1D2	P34982	312 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	PPP2R3A	Q06190	1150 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	RAB33A	Q14088	237 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	ZBTB6	Q15916	424 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	E2F4	Q16254	413 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	CYP26C1	Q6V0L0	522 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	CCDC73	Q6ZRK6	1079 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	SV2B	Q7L1I2	683 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	ZNF720	Q7Z2F6	126 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	PDILT	Q8N807	584 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	SMG7	Q92540	1137 aa	Known RBP	11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	KIF12	Q96FN5	646 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	ZNF396	Q96N95	335 aa	Predicted RBP	11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	MSTO1	Q9BUK6	570 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	FGFBP2	Q9BYJ0	223 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	PANK2	Q9BZ23	570 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	PRKD2	Q9BZL6	878 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	PLEKHA5	Q9HAU0	1116 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	WDR6	Q9NNW5	1121 aa	Known RBP	11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	OLFML3	Q9NRN5	406 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	TFIP11	Q9UBB9	837 aa	Known RBP	11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	SEL1L	Q9UBV2	794 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	HCN4	Q9Y3Q4	1203 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	BACE2	Q9Y5Z0	518 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	STYXL1	Q9Y6J8	313 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	OBSL1	O75147	1896 aa		11.74	□□□□□ -0.53
CHD2-217	ENST00000629136	TMEM221	A6NGB7	291 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	LACTBL1	A8MY62	500 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136		M0R296	226 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	SYN3	O14994	580 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	TBC1D4	O60343	1298 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	C8A	P07357	584 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	HSP90AA1	P07900	732 aa	Known RBP	11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	CYP3A5	P20815	502 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	LRPAP1	P30533	357 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	RPL9	P32969	192 aa	Known RBP	11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	CASP5	P51878	434 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	KCNA1	Q09470	495 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	MTMR3	Q13615	1198 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	KYAT1	Q16773	422 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	VARS2	Q5ST30	1063 aa	Known RBP	11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	SHC4	Q6S5L8	630 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	ANKS3	Q6ZW76	656 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	OTOP3	Q7RTS5	596 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	BMP8A	Q7Z5Y6	402 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	PLCD3	Q8N3E9	789 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	SPRYD3	Q8NCJ5	442 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	ACSF2	Q96CM8	615 aa	Predicted RBP	11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	HVCN1	Q96D96	273 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	SUSD3	Q96L08	255 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	UBQLN1	Q9UMX0	589 aa	Known RBP	11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	NUB1	Q9Y5A7	615 aa		11.73	□□□□□ -0.53
CHD2-217	ENST00000629136	COL4A2	P08572	1712 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	WDR27	A2RRH5	827 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	PPEF2	O14830	753 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	CUTA	O60888	179 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	PDIA4	P13667	645 aa	Known RBP	11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	GAP43	P17677	238 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	ADSS	P30520	456 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	HOXA9	P31269	272 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	MCM4	P33991	863 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	ACOT2	P49753	483 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	GUCY2F	P51841	1108 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	ROR1	Q01973	937 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	MRPL58	Q14197	206 aa	Known RBP	11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	L1TD1	Q5T7N2	865 aa	Known RBP	11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	LIN9	Q5TKA1	542 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	JADE1	Q6IE81	842 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	SLC8B1	Q6J4K2	584 aa		11.72	□□□□□ -0.53
CHD2-217	ENST00000629136	SLC7A14	Q8TBB6	771 aa		11.72	□□□□□ -0.53

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