RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 CELA2AP08217 269 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 CLRN1P58418 232 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 DSG1Q02413 1049 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 PWP2Q15269 919 aaKnown RBP4.17□□□□□ -1.74
VPS8-228ENST00000628962 PRAMEF14Q5SWL7 426 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 TSHZ3Q63HK5 1081 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 PDZD4Q76G19 769 aaPredicted RBP4.17□□□□□ -1.74
VPS8-228ENST00000628962 PTF1AQ7RTS3 328 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 NECAB2Q7Z6G3 386 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 WDR66Q8TBY9 1149 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 WASF1Q92558 559 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 TSR2Q969E8 191 aaKnown RBP4.17□□□□□ -1.74
VPS8-228ENST00000628962 MTMR8Q96EF0 704 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 UROC1Q96N76 676 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 SMAD5Q99717 465 aaKnown RBP4.17□□□□□ -1.74
VPS8-228ENST00000628962 AIFM2Q9BRQ8 373 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 PRSS50Q9UI38 385 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 WASHC2CQ9Y4E1 1318 aa4.17□□□□□ -1.74
VPS8-228ENST00000628962 ERCC6L2Q5T890 1561 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 A0A1B0GTW7 788 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 KIF3BO15066 747 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 KPNA6O60684 536 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 CXADRP78310 365 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 PHC1P78364 1004 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 PPARAQ07869 468 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 ITKQ08881 620 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 NFE2Q16621 373 aaPredicted RBP4.16□□□□□ -1.74
VPS8-228ENST00000628962 KIAA1614Q5VZ46 1190 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 STRA8Q7Z7C7 330 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 FAM43AQ8N2R8 423 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 RSAD2Q8WXG1 361 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 NACC2Q96BF6 587 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 RNF31Q96EP0 1072 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 PHACTR3Q96KR7 559 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 ZSWIM1Q9BR11 485 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 WNT8AQ9H1J5 351 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 GALNT9Q9HCQ5 603 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 IL17RBQ9NRM6 502 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 SLC5A4Q9NY91 659 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 ZKSCAN5Q9Y2L8 839 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 PNPLA7Q6ZV29 1317 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 HMGXB3Q12766 1538 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 DCAF1Q9Y4B6 1507 aa4.16□□□□□ -1.74
VPS8-228ENST00000628962 HECW2Q9P2P5 1572 aa4.15□□□□□ -1.74
VPS8-228ENST00000628962 RSF1Q96T23 1441 aaPredicted RBP4.15□□□□□ -1.74
VPS8-228ENST00000628962 CCDC78A2IDD5 438 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 FAM83GA6ND36 823 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 PLIN1O60240 522 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 BRINP1O60477 761 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 ONECUT2O95948 504 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 SCGB1D2O95969 90 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 ATF3P18847 181 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 POU3F2P20265 443 aaPredicted RBP4.15□□□□□ -1.75
VPS8-228ENST00000628962 CRHR1P34998 444 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 NEK2P51955 445 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 DHCR24Q15392 516 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 FAM47AQ5JRC9 791 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 RNF219Q5W0B1 726 aaPredicted RBP4.15□□□□□ -1.75
VPS8-228ENST00000628962 CCSAPQ6IQ19 270 aaPredicted RBP4.15□□□□□ -1.75
VPS8-228ENST00000628962 PASD1Q8IV76 773 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 LNX2Q8N448 690 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 ZNF610Q8N9Z0 462 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 DPF1Q92782 380 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 USP7Q93009 1102 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 FUBP3Q96I24 572 aaKnown RBP eCLIP4.15□□□□□ -1.75
VPS8-228ENST00000628962 TTC1Q99614 292 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 TIMP4Q99727 224 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 HEPHQ9BQS7 1158 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 ASPSCR1Q9BZE9 553 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 KCTD5Q9NXV2 234 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 PPP2R3BQ9Y5P8 575 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 SYNJ2O15056 1496 aa4.15□□□□□ -1.75
VPS8-228ENST00000628962 ZNF608Q9ULD9 1512 aaPredicted RBP4.15□□□□□ -1.75
VPS8-228ENST00000628962 SHTN1A0MZ66 631 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 CXorf49A8MYA2 514 aaPredicted RBP4.14□□□□□ -1.75
VPS8-228ENST00000628962 GPR39O43194 453 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 CAND2O75155 1236 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 EYA4O95677 639 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 SNRPA1P09661 255 aaKnown RBP4.14□□□□□ -1.75
VPS8-228ENST00000628962 WT1P19544 449 aaPredicted RBP4.14□□□□□ -1.75
VPS8-228ENST00000628962 FGFR4P22455 802 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 CTSSP25774 331 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 GNALP38405 381 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 RHBDL3P58872 404 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 TMPRSS15P98073 1019 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 MCL1Q07820 350 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 BIRC2Q13490 618 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 TRIM25Q14258 630 aaKnown RBP4.14□□□□□ -1.75
VPS8-228ENST00000628962 STAT4Q14765 748 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 PCBP1Q15365 356 aaKnown RBP eCLIP4.14□□□□□ -1.75
VPS8-228ENST00000628962 GPR162Q16538 588 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 CYP2A13Q16696 494 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 MED25Q71SY5 747 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 GRASPQ7Z6J2 395 aaPredicted RBP4.14□□□□□ -1.75
VPS8-228ENST00000628962 ZBTB46Q86UZ6 589 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 SPATS2Q86XZ4 545 aaKnown RBP4.14□□□□□ -1.75
VPS8-228ENST00000628962 CHPFQ8IZ52 775 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 PDPRQ8NCN5 879 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 OR2W6PQ8NHA6 318 aa4.14□□□□□ -1.75
VPS8-228ENST00000628962 CHTF18Q8WVB6 975 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms