RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 HIC1Q14526 733 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 ENOX2Q16206 610 aaKnown RBP10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 TRIM71Q2Q1W2 868 aaKnown RBP10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 ZNF699Q32M78 642 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 TDRD12Q587J7 1177 aaKnown RBP10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 ZNF667Q5HYK9 610 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 LCE2DQ5TA82 110 aaPredicted RBP10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 PDXDC1Q6P996 788 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 C15orf39Q6ZRI6 1047 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 SLC24A5Q71RS6 500 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 TRAPPC11Q7Z392 1133 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 PPM1KQ8N3J5 372 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 URGCPQ8TCY9 931 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 SNX27Q96L92 541 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 TTYH3Q9C0H2 523 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 TRPV6Q9H1D0 765 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 HIPK3Q9H422 1215 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 CDHR5Q9HBB8 845 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 UBE2TQ9NPD8 197 aaPredicted RBP10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 NLRC4Q9NPP4 1024 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 CNTN3Q9P232 1028 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 DNAJC12Q9UKB3 198 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 PCDHB2Q9Y5E7 798 aa10.92□□□□□ -0.66
FOXCUT-201ENST00000628509 RALGAPA2Q2PPJ7 1873 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 LRRC53A6NM62 1247 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 LACTBL1A8MY62 500 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 AKR1B10O60218 316 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 HLA-DRAP01903 254 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 CLTBP09497 229 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 FGFR4P22455 802 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 CD52P31358 61 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 SOX5P35711 763 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 TNFSF9P41273 254 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 FXR1P51114 621 aaKnown RBP eCLIP10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 TNNC1P63316 161 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 PTK2Q05397 1052 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 LPIN1Q14693 890 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 MEA1Q16626 185 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 GLB1LQ6UWU2 654 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 ZNF677Q86XU0 584 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 RPUSD2Q8IZ73 545 aaKnown RBP10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 ABI1Q8IZP0 508 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 LRRC52Q8N7C0 313 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 TMEM40Q8WWA1 233 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 DDX27Q96GQ7 796 aaKnown RBP10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 UROC1Q96N76 676 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 TSGA10Q9BZW7 698 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 HAPLN2Q9GZV7 340 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 GANQ9H2C0 597 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 TMX1Q9H3N1 280 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 ELAC1Q9H777 363 aaKnown RBP10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 CYP3A43Q9HB55 503 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 TMEM39AQ9NV64 488 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 DPP3Q9NY33 737 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 SNTG2Q9NY99 539 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 LRFN2Q9ULH4 789 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 IPPQ9Y573 584 aa10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.91□□□□□ -0.66
FOXCUT-201ENST00000628509 UMODL1Q5DID0 1318 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 ESPNB1AK53 854 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 RECQL4O94761 1208 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 EDN1P05305 212 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 THP07101 528 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 FAM163BP0C2L3 166 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 ACTN1P12814 892 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 FECHP22830 423 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 RPL9P32969 192 aaKnown RBP10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 PDE6CP51160 858 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 NOP14P78316 857 aaKnown RBP10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 DRAP1Q14919 205 aaPredicted RBP10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 SLC10A6Q3KNW5 377 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 SV2CQ496J9 727 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 TDRD10Q5VZ19 366 aaKnown RBP10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 JADE1Q6IE81 842 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 MRPL10Q7Z7H8 261 aaKnown RBP10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 CDR2LQ86X02 465 aaPredicted RBP10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 TMEM199Q8N511 208 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 TAS1R2Q8TE23 839 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 CALR3Q96L12 384 aaKnown RBP10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 POP1Q99575 1024 aaKnown RBP10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 ADAM2Q99965 735 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 APOL6Q9BWW8 343 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 MTMR12Q9C0I1 747 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 NIF3L1Q9GZT8 377 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 VRTNQ9H8Y1 702 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 RSAD1Q9HA92 442 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 RGS18Q9NS28 235 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 ATP11BQ9Y2G3 1177 aa10.9□□□□□ -0.66
FOXCUT-201ENST00000628509 F8VZ95 297 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 MED7O43513 233 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 ASS1P00966 412 aaKnown RBP10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 USP8P40818 1118 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 PRKCIP41743 596 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 SNX16P57768 344 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 GRIK3Q13003 919 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 IKBKEQ14164 716 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 BMS1Q14692 1282 aaKnown RBP10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 SEZ6Q53EL9 994 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 XKR4Q5GH76 650 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 C1orf220Q5T0J3 134 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms