RNA–Protein interactions for RNA: ENST00000628397.2

CCDC163-205, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-205ENST00000628397 TRAPPC11Q7Z392 1133 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 LRRC43Q8N309 656 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 GSTCDQ8NEC7 633 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 ZNF516Q92618 1163 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 TOP1MTQ969P6 601 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 C18orf25Q96B23 403 aaPredicted RBP13.2□□□□□ -0.3
CCDC163-205ENST00000628397 PCMTD1Q96MG8 357 aaPredicted RBP13.2□□□□□ -0.3
CCDC163-205ENST00000628397 NAP1L5Q96NT1 182 aaPredicted RBP13.2□□□□□ -0.3
CCDC163-205ENST00000628397 FAM193BQ96PV7 902 aaPredicted RBP13.2□□□□□ -0.3
CCDC163-205ENST00000628397 PPP1R10Q96QC0 940 aaKnown RBP13.2□□□□□ -0.3
CCDC163-205ENST00000628397 SLC9A7Q96T83 725 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 MIOSQ9NXC5 875 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 DPP3Q9NY33 737 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 GCNT4Q9P109 453 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 KANSL3Q9P2N6 904 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 TUBGCP4Q9UGJ1 667 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 ITGA11Q9UKX5 1188 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 PLAGL2Q9UPG8 496 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 SLC4A7Q9Y6M7 1214 aa13.2□□□□□ -0.3
CCDC163-205ENST00000628397 KIAA1671Q9BY89 1806 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 GTPBP10A4D1E9 387 aaKnown RBP13.19□□□□□ -0.3
CCDC163-205ENST00000628397 AP5Z1O43299 807 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 DGKIO75912 1065 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 HLA-DRAP01903 254 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 ITGB3P05106 788 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 CYP3A5P20815 502 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 AFF1P51825 1210 aaKnown RBP13.19□□□□□ -0.3
CCDC163-205ENST00000628397 GUCY2FP51841 1108 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 ZBTB6Q15916 424 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 GBP6Q6ZN66 633 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 C15orf39Q6ZRI6 1047 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 TMCO2Q7Z6W1 182 aaPredicted RBP13.19□□□□□ -0.3
CCDC163-205ENST00000628397 CRIPAKQ8N1N5 446 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 C1orf127Q8N9H9 656 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 CCDC150Q8NCX0 1101 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 FBXL13Q8NEE6 735 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 RNPC3Q96LT9 517 aaKnown RBP13.19□□□□□ -0.3
CCDC163-205ENST00000628397 CASD1Q96PB1 797 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 CRACR2AQ9BSW2 395 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 IMPG2Q9BZV3 1241 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 UBE2OQ9C0C9 1292 aaKnown RBP13.19□□□□□ -0.3
CCDC163-205ENST00000628397 GOLGA2P5Q9HBQ8 144 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 TBC1D13Q9NVG8 400 aa13.19□□□□□ -0.3
CCDC163-205ENST00000628397 CXXC1Q9P0U4 656 aaPredicted RBP13.19□□□□□ -0.3
CCDC163-205ENST00000628397 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 CASTOR2A6NHX0 329 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 H0YGN5 161 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 PMM2O15305 246 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 TEX33O43247 280 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 POLR2BP30876 1174 aaKnown RBP13.18□□□□□ -0.3
CCDC163-205ENST00000628397 RGS19P49795 217 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 ZNF75DP51815 510 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 SOX4Q06945 474 aaPredicted RBP13.18□□□□□ -0.3
CCDC163-205ENST00000628397 TUSC3Q13454 348 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 NCOA4Q13772 614 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 NR1I3Q14994 352 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 SYCP1Q15431 976 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 EXOC3L4Q17RC7 722 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 EPC2Q52LR7 807 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 TAS1R2Q8TE23 839 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 ANP32BQ92688 251 aaKnown RBP13.18□□□□□ -0.3
CCDC163-205ENST00000628397 ZNF560Q96MR9 790 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 YME1L1Q96TA2 773 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 ZBED2Q9BTP6 218 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 INTS2Q9H0H0 1204 aaKnown RBP13.18□□□□□ -0.3
CCDC163-205ENST00000628397 RAB20Q9NX57 234 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 GBF1Q92538 1859 aa13.18□□□□□ -0.3
CCDC163-205ENST00000628397 SCN1AP35498 2009 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 MKI67P46013 3256 aaKnown RBP13.17□□□□□ -0.3
CCDC163-205ENST00000628397 A0A1W2PQC6 194 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 GJB5O95377 273 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 VNN1O95497 513 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 ADCY5O95622 1261 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 ATP2A2P16615 1042 aaKnown RBP13.17□□□□□ -0.3
CCDC163-205ENST00000628397 LRPAP1P30533 357 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 RBP5P82980 135 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 NAB2Q15742 525 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 PTPN21Q16825 1174 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 ZNF699Q32M78 642 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 C9orf50Q5SZB4 431 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 CMTR2Q8IYT2 770 aaKnown RBP13.17□□□□□ -0.3
CCDC163-205ENST00000628397 TMEM130Q8N3G9 435 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 PHOSPHO2Q8TCD6 241 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 MRFAP1L1Q96HT8 127 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 UROC1Q96N76 676 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 ERGIC2Q96RQ1 377 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 LSM14BQ9BX40 385 aaKnown RBP13.17□□□□□ -0.3
CCDC163-205ENST00000628397 AGAP1Q9UPQ3 857 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 COQ4Q9Y3A0 265 aa13.17□□□□□ -0.3
CCDC163-205ENST00000628397 PODXLO00592 558 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC163-205ENST00000628397 SLC9A1P19634 815 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 RPL9P32969 192 aaKnown RBP13.16□□□□□ -0.3
CCDC163-205ENST00000628397 PNPLA4P41247 253 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 MYL6P60660 151 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 NOP14P78316 857 aaKnown RBP13.16□□□□□ -0.3
CCDC163-205ENST00000628397 DSC1Q08554 894 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 MYO1EQ12965 1108 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 BTG3Q14201 252 aaPredicted RBP13.16□□□□□ -0.3
CCDC163-205ENST00000628397 SHHQ15465 462 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms