RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 ZFP14Q9HCL3 533 aa9.47□□□□□ -0.89
TCF4-258ENST00000627320 GPSM3Q9Y4H4 160 aa9.47□□□□□ -0.89
TCF4-258ENST00000627320 SF3B1O75533 1304 aaKnown RBP eCLIP9.47□□□□□ -0.892e-6■■■■■ 104.7
TCF4-258ENST00000627320 SPECC1L-ADORA2AF8WAN1 911 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 INO80B-WBP1J3KQ70 363 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 SLC27A2O14975 620 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 SGSM2O43147 1006 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 ERLIN2O94905 339 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 CAPNS1P04632 268 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 CCDC192P0DO97 292 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 MYL4P12829 197 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 CPA1P15085 419 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 PSMC3P17980 439 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 CIITAP33076 1130 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 MCM5P33992 734 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 ADD1P35611 737 aaKnown RBP9.46□□□□□ -0.9
TCF4-258ENST00000627320 DNM2P50570 870 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 JAK3P52333 1124 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 ROR1Q01973 937 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 NUCB1Q02818 461 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 GRIK3Q13003 919 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 CAPSQ13938 189 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 RAB33AQ14088 237 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 EMC2Q15006 297 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 RTN1Q16799 776 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 MAMSTRQ6ZN01 415 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 SRGAP1Q7Z6B7 1085 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 REXO1Q8N1G1 1221 aaKnown RBP9.46□□□□□ -0.9
TCF4-258ENST00000627320 SMG9Q9H0W8 520 aaKnown RBP9.46□□□□□ -0.9
TCF4-258ENST00000627320 CEP72Q9P209 647 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 MTRRQ9UBK8 725 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 STK39Q9UEW8 545 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 KCNH3Q9ULD8 1083 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 PCDH15Q96QU1 1955 aa9.46□□□□□ -0.9
TCF4-258ENST00000627320 MUC22E2RYF6 1773 aaPredicted RBP9.45□□□□□ -0.9
TCF4-258ENST00000627320 CARNS1A5YM72 827 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 GOLGA8AA7E2F4 631 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 GOLGA8BA8MQT2 603 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 SLC37A4O43826 429 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 GABBR2O75899 941 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 PAPSS2O95340 614 aaPredicted RBP9.45□□□□□ -0.9
TCF4-258ENST00000627320 BCKDHBP21953 392 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 CTHP32929 405 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 LIFRP42702 1097 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 KPNA1P52294 538 aaPredicted RBP9.45□□□□□ -0.9
TCF4-258ENST00000627320 CCINQ13939 588 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 PPP2R5DQ14738 602 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 PFKFB3Q16875 520 aaPredicted RBP9.45□□□□□ -0.9
TCF4-258ENST00000627320 UVSSAQ2YD98 709 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 TTC22Q5TAA0 569 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 CACNA2D4Q7Z3S7 1137 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 FERMT3Q86UX7 667 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 MARCH9Q86YJ5 346 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 CHCHD4Q8N4Q1 142 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 PDCD7Q8N8D1 485 aaKnown RBP9.45□□□□□ -0.9
TCF4-258ENST00000627320 SHKBP1Q8TBC3 707 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 HNRNPLLQ8WVV9 542 aaKnown RBP9.45□□□□□ -0.9
TCF4-258ENST00000627320 RSPH1Q8WYR4 309 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 IRF7Q92985 503 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 TMEM87BQ96K49 555 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 CEP170P1Q96L14 293 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 DHX33Q9H6R0 707 aaKnown RBP9.45□□□□□ -0.9
TCF4-258ENST00000627320 FBRSL1Q9HCM7 1045 aaKnown RBP9.45□□□□□ -0.9
TCF4-258ENST00000627320 GDE1Q9NZC3 331 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 RGL1Q9NZL6 768 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 VPS54Q9P1Q0 977 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 GIT1Q9Y2X7 761 aa9.45□□□□□ -0.9
TCF4-258ENST00000627320 ATXN2Q99700 1313 aaKnown RBP9.45□□□□□ -0.9
TCF4-258ENST00000627320 MYOFQ9NZM1 2061 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 ACACAQ13085 2346 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 OTOL1A6NHN0 477 aaPredicted RBP9.44□□□□□ -0.9
TCF4-258ENST00000627320 ZNF263O14978 683 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 TBX3O15119 743 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 VNN2O95498 520 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 PRAMEF12O95522 483 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 PTPN2P17706 415 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 FGFR3P22607 806 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 CNR2P34972 360 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 CLCNKBP51801 687 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 SOX4Q06945 474 aaPredicted RBP9.44□□□□□ -0.9
TCF4-258ENST00000627320 TUSC3Q13454 348 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 ADCK5Q3MIX3 580 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 EEF1DP3Q658K8 133 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 FSTL4Q6MZW2 842 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 NOTUMQ6P988 496 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 PDZD4Q76G19 769 aaPredicted RBP9.44□□□□□ -0.9
TCF4-258ENST00000627320 SGMS1Q86VZ5 419 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 PROSER1Q86XN7 944 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 FRMD1Q8N878 549 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 OR2I1PQ8NGU4 316 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 RIN3Q8TB24 985 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 ETNPPLQ8TBG4 499 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 KCNV2Q8TDN2 545 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 PSPC1Q8WXF1 523 aaKnown RBP9.44□□□□□ -0.9
TCF4-258ENST00000627320 EZH1Q92800 747 aaPredicted RBP9.44□□□□□ -0.9
TCF4-258ENST00000627320 SMARCD2Q92925 531 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 MKNK1Q9BUB5 465 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 TPSD1Q9BZJ3 242 aa9.44□□□□□ -0.9
TCF4-258ENST00000627320 TRIM6Q9C030 488 aaPredicted RBP9.44□□□□□ -0.9
TCF4-258ENST00000627320 LSG1Q9H089 658 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms