RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, human

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM4-208	ENST00000626716	ABLIM3	O94929	683 aa		27.64	■■■□□ 2.02
R3HDM4-208	ENST00000626716	ELF1	P32519	619 aa		27.64	■■■□□ 2.02
R3HDM4-208	ENST00000626716	RPL9	P32969	192 aa	Known RBP	27.64	■■■□□ 2.02
R3HDM4-208	ENST00000626716	VARS2	Q5ST30	1063 aa	Known RBP	27.64	■■■□□ 2.02
R3HDM4-208	ENST00000626716	MPZL3	Q6UWV2	235 aa		27.64	■■■□□ 2.02
R3HDM4-208	ENST00000626716	KCNK18	Q7Z418	384 aa		27.64	■■■□□ 2.02
R3HDM4-208	ENST00000626716	KCNG4	Q8TDN1	519 aa		27.64	■■■□□ 2.02
R3HDM4-208	ENST00000626716	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	27.64	■■■□□ 2.02
R3HDM4-208	ENST00000626716	KCNG1	Q9UIX4	513 aa		27.64	■■■□□ 2.02
R3HDM4-208	ENST00000626716	MYH11	P35749	1972 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	KANSL1L	A0AUZ9	987 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ARHGEF37	A1IGU5	675 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ABLIM1	O14639	778 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	SYN3	O14994	580 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	RHO	P08100	348 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	GLUL	P15104	373 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	PTPN2	P17706	415 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	PFKP	Q01813	784 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ROR1	Q01973	937 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	PRKCQ	Q04759	706 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ING5	Q8WYH8	240 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	KXD1	Q9BQD3	176 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	AVEN	Q9NQS1	362 aa	Predicted RBP	27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	GDE1	Q9NZC3	331 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	CNTN3	Q9P232	1028 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716		R4GN57	208 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716	MIA3	Q5JRA6	1907 aa		27.63	■■■□□ 2.01
R3HDM4-208	ENST00000626716		H7C4K7	107 aa		27.62	■■■□□ 2.01
R3HDM4-208	ENST00000626716	TBC1D4	O60343	1298 aa		27.62	■■■□□ 2.01
R3HDM4-208	ENST00000626716	LMNA	P02545	664 aa	Known RBP	27.62	■■■□□ 2.01
R3HDM4-208	ENST00000626716	GUCY2C	P25092	1073 aa		27.62	■■■□□ 2.01
R3HDM4-208	ENST00000626716	MLF2	Q15773	248 aa	Predicted RBP	27.62	■■■□□ 2.01
R3HDM4-208	ENST00000626716	SPIRE2	Q8WWL2	714 aa		27.62	■■■□□ 2.01
R3HDM4-208	ENST00000626716	MCRS1	Q96EZ8	462 aa		27.62	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ZBTB45	Q96K62	511 aa	Predicted RBP	27.62	■■■□□ 2.01
R3HDM4-208	ENST00000626716	DDX23	Q9BUQ8	820 aa	Known RBP	27.62	■■■□□ 2.01
R3HDM4-208	ENST00000626716	NUB1	Q9Y5A7	615 aa		27.62	■■■□□ 2.01
R3HDM4-208	ENST00000626716	WDR27	A2RRH5	827 aa		27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	PRRG1	O14668	218 aa		27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	LRG1	P02750	347 aa		27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	SP9	P0CG40	484 aa		27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ATF2	P15336	505 aa		27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ARPP19	P56211	112 aa		27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	FOXK2	Q01167	660 aa		27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	STRN3	Q13033	797 aa		27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	MRPL58	Q14197	206 aa	Known RBP	27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ZRSR1	Q15695	479 aa	Known RBP	27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	C18orf25	Q96B23	403 aa	Predicted RBP	27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	KIF3A	Q9Y496	699 aa		27.61	■■■□□ 2.01
R3HDM4-208	ENST00000626716	LRRN2	O75325	713 aa		27.6	■■■□□ 2.01
R3HDM4-208	ENST00000626716	TOM1L1	O75674	476 aa		27.6	■■■□□ 2.01
R3HDM4-208	ENST00000626716	HARS	P12081	509 aa	Known RBP	27.6	■■■□□ 2.01
R3HDM4-208	ENST00000626716	SMTN	P53814	917 aa		27.6	■■■□□ 2.01
R3HDM4-208	ENST00000626716	SLC5A9	Q2M3M2	681 aa		27.6	■■■□□ 2.01
R3HDM4-208	ENST00000626716	RILPL1	Q5EBL4	403 aa		27.6	■■■□□ 2.01
R3HDM4-208	ENST00000626716	MCTP1	Q6DN14	999 aa		27.6	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ZC3H14	Q6PJT7	736 aa	Known RBP	27.6	■■■□□ 2.01
R3HDM4-208	ENST00000626716	TCEAL8	Q8IYN2	117 aa		27.6	■■■□□ 2.01
R3HDM4-208	ENST00000626716	KCTD17	Q8N5Z5	321 aa		27.6	■■■□□ 2.01
R3HDM4-208	ENST00000626716	FANCM	Q8IYD8	2048 aa		27.6	■■■□□ 2.01
R3HDM4-208	ENST00000626716	MEFV	O15553	781 aa	Predicted RBP	27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ECI2	O75521	394 aa		27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	PLS3	P13797	630 aa		27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	RAD51AP2	Q09MP3	1159 aa		27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	SLC10A6	Q3KNW5	377 aa		27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	HYI	Q5T013	277 aa		27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	SYT2	Q8N9I0	419 aa	Predicted RBP	27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	TMEM161B	Q8NDZ6	487 aa		27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	BCO2	Q9BYV7	579 aa		27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	OSBPL6	Q9BZF3	934 aa		27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	CYP4F11	Q9HBI6	524 aa		27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	FBXL5	Q9UKA1	691 aa		27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	DCHS1	Q96JQ0	3298 aa		27.59	■■■□□ 2.01
R3HDM4-208	ENST00000626716	FAM170B	A6NMN3	283 aa		27.58	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ATP2C1	P98194	919 aa	Predicted RBP	27.58	■■■□□ 2.01
R3HDM4-208	ENST00000626716	NOLC1	Q14978	699 aa	Known RBP eCLIP	27.58	■■■□□ 2.01
R3HDM4-208	ENST00000626716	TPGS2	Q68CL5	300 aa		27.58	■■■□□ 2.01
R3HDM4-208	ENST00000626716	SUSD3	Q96L08	255 aa		27.58	■■■□□ 2.01
R3HDM4-208	ENST00000626716	PNMA5	Q96PV4	448 aa		27.58	■■■□□ 2.01
R3HDM4-208	ENST00000626716	ANKFY1	Q9P2R3	1169 aa		27.58	■■■□□ 2.01
R3HDM4-208	ENST00000626716	MTF2	Q9Y483	593 aa	Predicted RBP	27.58	■■■□□ 2.01
R3HDM4-208	ENST00000626716	FRYL	O94915	3013 aa		27.57	■■■□□ 2
R3HDM4-208	ENST00000626716	SEC24A	O95486	1093 aa		27.57	■■■□□ 2
R3HDM4-208	ENST00000626716	MAPT	P10636	758 aa	Known RBP	27.57	■■■□□ 2
R3HDM4-208	ENST00000626716	UBXN2B	Q14CS0	331 aa		27.57	■■■□□ 2
R3HDM4-208	ENST00000626716	CTXN3	Q4LDR2	81 aa		27.57	■■■□□ 2
R3HDM4-208	ENST00000626716	POTEH	Q6S545	545 aa		27.57	■■■□□ 2
R3HDM4-208	ENST00000626716	ZPBP2	Q6X784	338 aa		27.57	■■■□□ 2
R3HDM4-208	ENST00000626716	APPL2	Q8NEU8	664 aa		27.57	■■■□□ 2
R3HDM4-208	ENST00000626716	CORO1B	Q9BR76	489 aa		27.57	■■■□□ 2
R3HDM4-208	ENST00000626716	PLA2G2F	Q9BZM2	168 aa		27.57	■■■□□ 2
R3HDM4-208	ENST00000626716	PDCD11	Q14690	1871 aa	Known RBP	27.57	■■■□□ 2
R3HDM4-208	ENST00000626716	ZNF197	O14709	1029 aa		27.56	■■■□□ 2
R3HDM4-208	ENST00000626716	CLDN3	O15551	220 aa		27.56	■■■□□ 2
R3HDM4-208	ENST00000626716	CEBPB	P17676	345 aa		27.56	■■■□□ 2
R3HDM4-208	ENST00000626716	MCM4	P33991	863 aa		27.56	■■■□□ 2
R3HDM4-208	ENST00000626716	ID4	P47928	161 aa		27.56	■■■□□ 2
R3HDM4-208	ENST00000626716	SLC12A3	P55017	1021 aa		27.56	■■■□□ 2
R3HDM4-208	ENST00000626716	SEZ6	Q53EL9	994 aa		27.56	■■■□□ 2
R3HDM4-208	ENST00000626716	TANGO2	Q6ICL3	276 aa		27.56	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms