RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 TRIM49CP0CI26 452 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 GTF2H1P32780 548 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 SPAG1Q07617 926 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 ZACNQ401N2 412 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 NT5DC4Q86YG4 428 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 PAAF1Q9BRP4 392 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 TBC1D13Q9NVG8 400 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 PCDHB7Q9Y5E2 793 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 AMHP03971 560 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 ACTN1P12814 892 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 SCNN1GP51170 649 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 KCNMA1Q12791 1236 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 EPC2Q52LR7 807 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 HSP90AA4PQ58FG1 418 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 APBB1IPQ7Z5R6 666 aaPredicted RBP11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 HERC6Q8IVU3 1022 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 RSPH1Q8WYR4 309 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 SLC9A7Q96T83 725 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 XYLT2Q9H1B5 865 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 METTL14Q9HCE5 456 aaKnown RBP11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 CST3P01034 146 aaPredicted RBP11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 EPB41P11171 864 aaKnown RBP11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 NR1I3Q14994 352 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 C3orf58Q8NDZ4 430 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 SEMA4DQ92854 862 aa11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 TRIM6Q9C030 488 aaPredicted RBP11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 ARMCX3Q9UH62 379 aaPredicted RBP11.45□□□□□ -0.58
KCNMA1-225ENST00000626620 PPEF2O14830 753 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 AARSP49588 968 aaKnown RBP eCLIP11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 UPP1Q16831 310 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 NOMO2Q5JPE7 1267 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 SARM1Q6SZW1 724 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 SV2AQ7L0J3 742 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 RNF168Q8IYW5 571 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 CLP1Q92989 425 aaKnown RBP11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 TUBGCP2Q9BSJ2 902 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 APOL6Q9BWW8 343 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 LCHNA4D1U4 455 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 GUCY2FP51841 1108 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 PPP2R3AQ06190 1150 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 GRIK3Q13003 919 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 VWA3BQ502W6 1294 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 ZNF697Q5TEC3 545 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 LMBRD2Q68DH5 695 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 CMTR2Q8IYT2 770 aaKnown RBP11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 NRDE2Q9H7Z3 1164 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 SIX2Q9NPC8 291 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 CACNG4Q9UBN1 327 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 FGFR1OPO95684 399 aaKnown RBP11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 POU3F3P20264 500 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 MATR3P43243 847 aaKnown RBP eCLIP11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 KCNH2Q12809 1159 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 MAN2A1Q16706 1144 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 GLRA4Q5JXX5 417 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 BCL7CQ8WUZ0 217 aaPredicted RBP11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 PBX4Q9BYU1 374 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 MTMR12Q9C0I1 747 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 VRTNQ9H8Y1 702 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 GOLGA2P5Q9HBQ8 144 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 DNAJB4Q9UDY4 337 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 PARP2Q9UGN5 583 aa11.44□□□□□ -0.58
KCNMA1-225ENST00000626620 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 F8W810 466 aa11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 STAU1O95793 577 aaKnown RBP11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 FMO5P49326 533 aa11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 COPB1P53618 953 aaKnown RBP11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 SURF1Q15526 300 aa11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 TMEM132AQ24JP5 1023 aa11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 TMEM8AQ9HCN3 771 aa11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 MARCH5Q9NX47 278 aa11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 TRAPPC11Q7Z392 1133 aa11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 CCDC127Q96BQ5 260 aa11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 VN1R3Q9BXE9 311 aa11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 SIK3Q9Y2K2 1263 aa11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 R3HCC1Q9Y3T6 440 aaKnown RBP11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 MRPL42Q9Y6G3 142 aaKnown RBP11.43□□□□□ -0.58
KCNMA1-225ENST00000626620 GRXCR1A8MXD5 290 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 SPTLC1O15269 473 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 POMCP01189 267 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 TMEM132DQ14C87 1099 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 C9orf57Q5W0N0 161 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 COL25A1Q9BXS0 654 aaPredicted RBP11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 NDST4Q9H3R1 872 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 YBX2Q9Y2T7 364 aaKnown RBP11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 SLC4A7Q9Y6M7 1214 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 GTPBP10A4D1E9 387 aaKnown RBP11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 TMEM189-UBE2V1I3L0A0 370 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 TEX33O43247 280 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 THP07101 528 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 DNAJB2P25686 324 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 YARSP54577 528 aaKnown RBP11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 HSP90AA2PQ14568 343 aaPredicted RBP11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 GRIN2CQ14957 1233 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 SPRED2Q7Z698 418 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 TMEM173Q86WV6 379 aaPredicted RBP11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 FAM114A1Q8IWE2 563 aa11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 RNPC3Q96LT9 517 aaKnown RBP11.42□□□□□ -0.58
KCNMA1-225ENST00000626620 APOBEC3GQ9HC16 384 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms