RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PAX3P23760 479 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 KRT85P78386 507 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 PSMD5Q16401 504 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 RARS2Q5T160 578 aaKnown RBP24.33■■□□□ 1.49
SF1-220ENST00000626028 CD300LGQ6UXG3 332 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 RTL10Q7L3V2 364 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 CEP57Q86XR8 500 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 TRIM9Q9C026 710 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 ASB7Q9H672 318 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 GOLGA2P5Q9HBQ8 144 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 MAN1C1Q9NR34 630 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 ZDHHC7Q9NXF8 308 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 UBQLN1Q9UMX0 589 aaKnown RBP24.33■■□□□ 1.49
SF1-220ENST00000626028 USTQ9Y2C2 406 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 BACE2Q9Y5Z0 518 aa24.33■■□□□ 1.49
SF1-220ENST00000626028 SYN3O14994 580 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 GCNT3O95395 438 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 LRPAP1P30533 357 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 ENOX2Q16206 610 aaKnown RBP24.32■■□□□ 1.48
SF1-220ENST00000626028 FOXD4L6Q3SYB3 417 aaPredicted RBP24.32■■□□□ 1.48
SF1-220ENST00000626028 SEZ6Q53EL9 994 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 ADALQ6DHV7 355 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 FOXD4L3Q6VB84 417 aaPredicted RBP24.32■■□□□ 1.48
SF1-220ENST00000626028 RNF135Q8IUD6 432 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 C3orf58Q8NDZ4 430 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 DHX58Q96C10 678 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 C7orf25Q9BPX7 421 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 CLSTN3Q9BQT9 956 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 APOL5Q9BWW9 433 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 TMEM206Q9H813 350 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 MTRRQ9UBK8 725 aa24.32■■□□□ 1.48
SF1-220ENST00000626028 AGO2Q9UKV8 859 aaKnown RBP24.32■■□□□ 1.48
SF1-220ENST00000626028 TGM5O43548 720 aa24.31■■□□□ 1.48
SF1-220ENST00000626028 TNFSF9P41273 254 aa24.31■■□□□ 1.48
SF1-220ENST00000626028 KHSRPQ92945 711 aaKnown RBP eCLIP24.31■■□□□ 1.482e-11■■■■□ 20.5
SF1-220ENST00000626028 C18orf25Q96B23 403 aaPredicted RBP24.31■■□□□ 1.48
SF1-220ENST00000626028 KIF12Q96FN5 646 aa24.31■■□□□ 1.48
SF1-220ENST00000626028 POMKQ9H5K3 350 aa24.31■■□□□ 1.48
SF1-220ENST00000626028 ZDHHC9Q9Y397 364 aa24.31■■□□□ 1.48
SF1-220ENST00000626028 NUB1Q9Y5A7 615 aa24.31■■□□□ 1.48
SF1-220ENST00000626028 LACTBL1A8MY62 500 aa24.3■■□□□ 1.48
SF1-220ENST00000626028 ANKRD63C9JTQ0 380 aa24.3■■□□□ 1.48
SF1-220ENST00000626028 POLR2DO15514 142 aaKnown RBP24.3■■□□□ 1.48
SF1-220ENST00000626028 GPR37L1O60883 481 aa24.3■■□□□ 1.48
SF1-220ENST00000626028 RAB33AQ14088 237 aa24.3■■□□□ 1.48
SF1-220ENST00000626028 PRSS55Q6UWB4 352 aaPredicted RBP24.3■■□□□ 1.48
SF1-220ENST00000626028 TMC5Q6UXY8 1006 aa24.3■■□□□ 1.48
SF1-220ENST00000626028 C12orf76Q8N812 135 aaPredicted RBP24.3■■□□□ 1.48
SF1-220ENST00000626028 POMGNT1Q8WZA1 660 aa24.3■■□□□ 1.48
SF1-220ENST00000626028 RPGRIP1Q96KN7 1286 aa24.3■■□□□ 1.48
SF1-220ENST00000626028 SUSD3Q96L08 255 aa24.3■■□□□ 1.48
SF1-220ENST00000626028 SCAND2PQ9GZW5 306 aaPredicted RBP24.3■■□□□ 1.48
SF1-220ENST00000626028 EPHX3Q9H6B9 360 aa24.3■■□□□ 1.48
SF1-220ENST00000626028 USP25Q9UHP3 1055 aa24.3■■□□□ 1.48
SF1-220ENST00000626028 C2CD2Q9Y426 696 aa24.3■■□□□ 1.48
SF1-220ENST00000626028 KIAA0391O15091 583 aaKnown RBP24.29■■□□□ 1.48
SF1-220ENST00000626028 LDHAP00338 332 aaKnown RBP24.29■■□□□ 1.48
SF1-220ENST00000626028 GARTP22102 1010 aa24.29■■□□□ 1.48
SF1-220ENST00000626028 PALB2Q86YC2 1186 aa24.29■■□□□ 1.48
SF1-220ENST00000626028 NT5DC4Q86YG4 428 aa24.29■■□□□ 1.48
SF1-220ENST00000626028 PLCD3Q8N3E9 789 aa24.29■■□□□ 1.48
SF1-220ENST00000626028 KREMEN2Q8NCW0 462 aa24.29■■□□□ 1.48
SF1-220ENST00000626028 FBXW11Q9UKB1 542 aa24.29■■□□□ 1.48
SF1-220ENST00000626028 KCNH3Q9ULD8 1083 aa24.29■■□□□ 1.48
SF1-220ENST00000626028 SCN1AP35498 2009 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 DOCK8Q8NF50 2099 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 CCDC195A0A1B0GUA6 201 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 H7C4K7 107 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 EIF3DO15371 548 aaKnown RBP eCLIP24.28■■□□□ 1.48
SF1-220ENST00000626028 IL18RAPO95256 599 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 CMA1P23946 247 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 ADSSP30520 456 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 HOXA9P31269 272 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 UVSSAQ2YD98 709 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 ZBTB41Q5SVQ8 909 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 SPATA1Q5VX52 437 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 SYCP3Q8IZU3 236 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 APPL2Q8NEU8 664 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 BEST2Q8NFU1 509 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 LEO1Q8WVC0 666 aaPredicted RBP24.28■■□□□ 1.48
SF1-220ENST00000626028 SPATA32Q96LK8 384 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 OXCT2Q9BYC2 517 aaPredicted RBP24.28■■□□□ 1.48
SF1-220ENST00000626028 TBC1D7Q9P0N9 293 aa24.28■■□□□ 1.48
SF1-220ENST00000626028 PVALEFA0A1B0GWK0 134 aa24.27■■□□□ 1.48
SF1-220ENST00000626028 ZMYND10O75800 440 aa24.27■■□□□ 1.48
SF1-220ENST00000626028 HNRNPA1P09651 372 aaKnown RBP eCLIP24.27■■□□□ 1.48
SF1-220ENST00000626028 RPL17P18621 184 aaKnown RBP24.27■■□□□ 1.48
SF1-220ENST00000626028 TKTP29401 623 aaKnown RBP24.27■■□□□ 1.48
SF1-220ENST00000626028 BRCC3P46736 316 aa24.27■■□□□ 1.48
SF1-220ENST00000626028 CASP5P51878 434 aa24.27■■□□□ 1.48
SF1-220ENST00000626028 ASIC1P78348 528 aa24.27■■□□□ 1.48
SF1-220ENST00000626028 SLC8B1Q6J4K2 584 aa24.27■■□□□ 1.48
SF1-220ENST00000626028 ZDHHC14Q8IZN3 488 aa24.27■■□□□ 1.48
SF1-220ENST00000626028 TUBGCP4Q9UGJ1 667 aa24.27■■□□□ 1.48
SF1-220ENST00000626028 DOCK6Q96HP0 2047 aa24.27■■□□□ 1.48
SF1-220ENST00000626028 M0QZQ0 153 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 MYL1P05976 194 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 POU2F2P09086 479 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 SLFN14P0C7P3 912 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 MYBP10242 640 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms