RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 GNA15P30679 374 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 ABCB5Q2M3G0 1257 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 C3orf62Q6ZUJ4 267 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 KCTD1Q719H9 257 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 CCDC103Q8IW40 242 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 TUBGCP3Q96CW5 907 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 ARHGEF26Q96DR7 871 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 NACA2Q9H009 215 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 C20orf96Q9NUD7 363 aaPredicted RBP9.36□□□□□ -0.91
VCL-206ENST00000623461 KLHL8Q9P2G9 620 aaPredicted RBP9.36□□□□□ -0.91
VCL-206ENST00000623461 ALG6Q9Y672 507 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 WEE2P0C1S8 567 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 NPR1P16066 1061 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 CD58P19256 250 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 PLOD1Q02809 727 aaPredicted RBP9.36□□□□□ -0.91
VCL-206ENST00000623461 LPCAT2Q7L5N7 544 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 CLEC4FQ8N1N0 589 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 LBHD1Q9BQE6 289 aaPredicted RBP9.36□□□□□ -0.91
VCL-206ENST00000623461 BFARQ9NZS9 450 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 XPO7Q9UIA9 1087 aaKnown RBP9.36□□□□□ -0.91
VCL-206ENST00000623461 PPME1Q9Y570 386 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 CAPN6Q9Y6Q1 641 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 SYNJ2BP-COX16A0A087WUM0 186 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 GSTT1P30711 240 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 EIF2B2P49770 351 aaKnown RBP9.36□□□□□ -0.91
VCL-206ENST00000623461 PTPAQ15257 358 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 FAM149B1Q96BN6 582 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 PGM2Q96G03 612 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 HEXIM2Q96MH2 286 aaKnown RBP9.36□□□□□ -0.91
VCL-206ENST00000623461 ZNF184Q99676 751 aaPredicted RBP9.36□□□□□ -0.91
VCL-206ENST00000623461 COX16Q9P0S2 106 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 GLI1P08151 1106 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 KIAA0825Q8IV33 1275 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 IGDCC4Q8TDY8 1250 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 APBB2Q92870 758 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 FRMD8P1Q9BZ68 369 aaPredicted RBP9.36□□□□□ -0.91
VCL-206ENST00000623461 CTNNAL1Q9UBT7 734 aa9.36□□□□□ -0.91
VCL-206ENST00000623461 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.36□□□□□ -0.91
VCL-206ENST00000623461 POTEFA5A3E0 1075 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 GUCY1A2P33402 732 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 PPARGP37231 505 aaPredicted RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 TFAMQ00059 246 aaKnown RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 POTEEQ6S8J3 1075 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 SLC13A5Q86YT5 568 aaPredicted RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 MAGEB5Q9BZ81 275 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 BRD8Q9H0E9 1235 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 ABCA9Q8IUA7 1624 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 PNPLA7Q6ZV29 1317 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 SFI1A8K8P3 1242 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 ALBP02768 609 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 COMTP21964 271 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 KLK7P49862 253 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 ERFP50548 548 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 ZNF844Q08AG5 666 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 TBL3Q12788 808 aaKnown RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 CHI3L2Q15782 390 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 KBTBD12Q3ZCT8 623 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 RYBPQ8N488 228 aaPredicted RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 TATDN2Q93075 761 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 HEY1Q9Y5J3 304 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 GNPATO15228 680 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 PJA2O43164 708 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 PMLP29590 882 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 BCAR1P56945 870 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 LRRC6Q86X45 466 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 ZNF786Q8N393 782 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 MREGQ8N565 214 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 AGAP11Q8TF27 550 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 SH3GL1Q99961 368 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 SLC24A2Q9UI40 661 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 CAMSAP1Q5T5Y3 1602 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 DLGAP3O95886 979 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 CPA2P48052 419 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 MYLK4Q86YV6 388 aaPredicted RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 PPIL6Q8IXY8 311 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 MSTO1Q9BUK6 570 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 DHX36Q9H2U1 1008 aaKnown RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 EPS8L2Q9H6S3 715 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 STK32BQ9NY57 414 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 ATXN10Q9UBB4 475 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 NXF1Q9UBU9 619 aaKnown RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 ZC3H7BQ9UGR2 993 aaKnown RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 EMSYQ7Z589 1322 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 HNRNPCL2B2RXH8 293 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 CLASP2O75122 1294 aaKnown RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 PEX3P56589 373 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 OASLQ15646 514 aaKnown RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 EZH2Q15910 746 aaKnown RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 ITPRIPL1Q6GPH6 555 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 TMEM270Q6UE05 265 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 MTDHQ86UE4 582 aaKnown RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 DCAF4Q8WV16 495 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 CCDC28BQ9BUN5 200 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 BSDC1Q9NW68 430 aaPredicted RBP9.35□□□□□ -0.91
VCL-206ENST00000623461 ARHGEF37A1IGU5 675 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 USP17L3A6NCW0 530 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 USP17L4A6NCW7 530 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 IGKV5-2P06315 115 aa9.35□□□□□ -0.91
VCL-206ENST00000623461 OCM2P0CE71 109 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms