RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NLRP7Q8WX94 980 aa17.52■□□□□ 0.39
LDB3-208ENST00000623007 RHOXF2Q9BQY4 288 aa17.52■□□□□ 0.39
LDB3-208ENST00000623007 GCOM2Q9BZD3 368 aaPredicted RBP17.52■□□□□ 0.39
LDB3-208ENST00000623007 CDT1Q9H211 546 aa17.52■□□□□ 0.39
LDB3-208ENST00000623007 NMRK2Q9NPI5 230 aa17.52■□□□□ 0.39
LDB3-208ENST00000623007 A0A087WZ62 844 aa17.51■□□□□ 0.39
LDB3-208ENST00000623007 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.51■□□□□ 0.39
LDB3-208ENST00000623007 IGF2BP3O00425 579 aaKnown RBP eCLIP17.51■□□□□ 0.39
LDB3-208ENST00000623007 MMEP08473 750 aa17.51■□□□□ 0.39
LDB3-208ENST00000623007 ZNF286BP0CG31 522 aa17.51■□□□□ 0.39
LDB3-208ENST00000623007 TNFRSF8P28908 595 aa17.51■□□□□ 0.39
LDB3-208ENST00000623007 HDXQ7Z353 690 aa17.51■□□□□ 0.39
LDB3-208ENST00000623007 RASGEF1CQ8N431 466 aa17.51■□□□□ 0.39
LDB3-208ENST00000623007 EIF1ADQ8N9N8 165 aaKnown RBP17.51■□□□□ 0.39
LDB3-208ENST00000623007 SCLT1Q96NL6 688 aa17.51■□□□□ 0.39
LDB3-208ENST00000623007 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.51■□□□□ 0.39
LDB3-208ENST00000623007 FDXACB1Q9BRP7 624 aaPredicted RBP17.51■□□□□ 0.39
LDB3-208ENST00000623007 ZNF518BQ9C0D4 1074 aa17.51■□□□□ 0.39
LDB3-208ENST00000623007 WNT8AQ9H1J5 351 aa17.51■□□□□ 0.39
LDB3-208ENST00000623007 PCDHB4Q9Y5E5 795 aa17.51■□□□□ 0.39
LDB3-208ENST00000623007 PDE2AO00408 941 aaPredicted RBP17.5■□□□□ 0.39
LDB3-208ENST00000623007 NCK2O43639 380 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 BUB1BO60566 1050 aaPredicted RBP17.5■□□□□ 0.39
LDB3-208ENST00000623007 CLSTN1O94985 981 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 LSM8O95777 96 aaKnown RBP17.5■□□□□ 0.39
LDB3-208ENST00000623007 ACO1P21399 889 aaKnown RBP17.5■□□□□ 0.39
LDB3-208ENST00000623007 NSFP46459 744 aaKnown RBP17.5■□□□□ 0.39
LDB3-208ENST00000623007 LIN9Q5TKA1 542 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 C8orf74Q6P047 294 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 TLK2Q86UE8 772 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 REM2Q8IYK8 340 aaPredicted RBP17.5■□□□□ 0.39
LDB3-208ENST00000623007 KRT222Q8N1A0 295 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 USP38Q8NB14 1042 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 PI4K2AQ9BTU6 479 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 VRTNQ9H8Y1 702 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 PLEKHA5Q9HAU0 1116 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 MRPL47Q9HD33 250 aaKnown RBP17.5■□□□□ 0.39
LDB3-208ENST00000623007 DERAQ9Y315 318 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 C2CD2Q9Y426 696 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 TLL2Q9Y6L7 1015 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 KAT6AQ92794 2004 aa17.5■□□□□ 0.39
LDB3-208ENST00000623007 MBLAC1A4D2B0 266 aaPredicted RBP17.49■□□□□ 0.39
LDB3-208ENST00000623007 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
LDB3-208ENST00000623007 CYP1A1P04798 512 aaPredicted RBP17.49■□□□□ 0.39
LDB3-208ENST00000623007 ZNF865P0CJ78 1059 aaPredicted RBP17.49■□□□□ 0.39
LDB3-208ENST00000623007 UNGP13051 313 aaPredicted RBP17.49■□□□□ 0.39
LDB3-208ENST00000623007 GNA15P30679 374 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 CXCR5P32302 372 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 SLC1A1P43005 524 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 CENPCQ03188 943 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 ZBTB41Q5SVQ8 909 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 TMEM63BQ5T3F8 832 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 GJC2Q5T442 439 aaPredicted RBP17.49■□□□□ 0.39
LDB3-208ENST00000623007 TAF3Q5VWG9 929 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 THNSL1Q8IYQ7 743 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 NME8Q8N427 588 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 OR5B17Q8NGF7 314 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 CEP83Q9Y592 693 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 SCINQ9Y6U3 715 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 PTPRJQ12913 1337 aa17.49■□□□□ 0.39
LDB3-208ENST00000623007 GOLGA6L10A0A0M3HER8 536 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 A0A1B0GUA9 196 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 CCDC66A2RUB6 948 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 DYNC1LI2O43237 492 aaPredicted RBP17.48■□□□□ 0.39
LDB3-208ENST00000623007 STAU1O95793 577 aaKnown RBP17.48■□□□□ 0.39
LDB3-208ENST00000623007 TNFSF9P41273 254 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 TM4SF4P48230 202 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 TFAMQ00059 246 aaKnown RBP17.48■□□□□ 0.39
LDB3-208ENST00000623007 AMHR2Q16671 573 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 LONRF2Q1L5Z9 754 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 ZNF699Q32M78 642 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 RBBP8NLQ8NC74 664 aaPredicted RBP17.48■□□□□ 0.39
LDB3-208ENST00000623007 ZNF653Q96CK0 615 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 PCDHB18PQ96TA0 734 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 MTMR12Q9C0I1 747 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 TAS2R14Q9NYV8 317 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 PASKQ96RG2 1323 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 EVPLQ92817 2033 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 MED7O43513 233 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 STAG3L1P0CL83 205 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 AKR1A1P14550 325 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 ZNF132P52740 706 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 C1QBPQ07021 282 aaKnown RBP17.48■□□□□ 0.39
LDB3-208ENST00000623007 LMBRD2Q68DH5 695 aaPredicted RBP17.48■□□□□ 0.39
LDB3-208ENST00000623007 TMEM270Q6UE05 265 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 IFT20Q8IY31 132 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 KIAA0319LQ8IZA0 1049 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 ZNF564Q8TBZ8 553 aaPredicted RBP17.48■□□□□ 0.39
LDB3-208ENST00000623007 FAM212AQ96EL1 285 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 PNKPQ96T60 521 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 PDZD7Q9H5P4 517 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 VIPAS39Q9H9C1 493 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 CYP3A43Q9HB55 503 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 OSGEPQ9NPF4 335 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 FAM53CQ9NYF3 392 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 STIM2Q9P246 746 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 TMEM59LQ9UK28 342 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 ITGA11Q9UKX5 1188 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 NUB1Q9Y5A7 615 aa17.48■□□□□ 0.39
LDB3-208ENST00000623007 HAS3O00219 553 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms