RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 GARTP22102 1010 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 MCM4P33991 863 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 SMAD4Q13485 552 aaKnown RBP15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 TMEM132DQ14C87 1099 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 RTP2Q5QGT7 225 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 KIAA0319Q5VV43 1072 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 JADE1Q6IE81 842 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 ANKRD54Q6NXT1 300 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 PDXDC1Q6P996 788 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 TMEM184AQ6ZMB5 413 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 KRBA2Q6ZNG9 492 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 GLYCTKQ8IVS8 523 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 NELFCDQ8IXH7 590 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 C3orf58Q8NDZ4 430 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 BEST2Q8NFU1 509 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 MSLNLQ96KJ4 702 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 TSPAN18Q96SJ8 248 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 CBWD1Q9BRT8 395 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 PCIF1Q9H4Z3 704 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 CHST7Q9NS84 486 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 CHMP5Q9NZZ3 219 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 UBE4BO95155 1302 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 GOLGA8IPA6NC78 632 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 GOLGA8JA6NMD2 632 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 I3L4J1 428 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 TEX28O15482 410 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 MBTPS2O43462 519 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 LILRB3O75022 631 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 IL18RAPO95256 599 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 EPCAMP16422 314 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 HOXB8P17481 243 aaPredicted RBP15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 BRCC3P46736 316 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 PSMD5Q16401 504 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 KMT5BQ4FZB7 885 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 ELMSAN1Q6PJG2 1045 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 PRSS55Q6UWB4 352 aaPredicted RBP15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 SMRP1Q8NCR6 262 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 NECAB3Q96P71 396 aaPredicted RBP15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 ASB7Q9H672 318 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 DZANK1Q9NVP4 752 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 RBAKQ9NYW8 714 aaPredicted RBP15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 TTC28Q96AY4 2481 aa15.17■□□□□ 0.02
PCDHGC3-208ENST00000622836 CUL9Q8IWT3 2517 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 KIAA0391O15091 583 aaKnown RBP15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 EXTL3O43909 919 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 GLUD1P00367 558 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 RPN1P04843 607 aaKnown RBP15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 NFICP08651 508 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 RPL17P18621 184 aaKnown RBP15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 CYP3A5P20815 502 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 CLCN4P51793 760 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 EHHADHQ08426 723 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 PSMD2Q13200 908 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 KCNC3Q14003 757 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 CES5AQ6NT32 575 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 KANK3Q6NY19 840 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 EPM2AIP1Q7L775 607 aaPredicted RBP15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 HS2ST1Q7LGA3 356 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 PALB2Q86YC2 1186 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 GPR65Q8IYL9 337 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 GPD1LQ8N335 351 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 ZNF507Q8TCN5 953 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 SLC22A17Q8WUG5 538 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 SCFD1Q8WVM8 642 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 FBXL18Q96ME1 805 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 RXFP1Q9HBX9 757 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 DPP7Q9UHL4 492 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 DERAQ9Y315 318 aa15.16■□□□□ 0.02
PCDHGC3-208ENST00000622836 PDCD11Q14690 1871 aaKnown RBP15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 KLRC4O43908 158 aa15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 ADRB2P07550 413 aa15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 PRR29P0C7W0 189 aa15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 FGFR3P22607 806 aa15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 IGFBP6P24592 240 aaPredicted RBP15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 TKTP29401 623 aaKnown RBP15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 SSTR3P32745 418 aaPredicted RBP15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 GUCY2FP51841 1108 aa15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 POU5F1Q01860 360 aaKnown RBP15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 ZBTB6Q15916 424 aa15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 RARS2Q5T160 578 aaKnown RBP15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 SPATA1Q5VX52 437 aa15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 CRELD2Q6UXH1 353 aaPredicted RBP15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 BRSK2Q8IWQ3 736 aa15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 LNX1Q8TBB1 728 aaPredicted RBP15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 PIK3R5Q8WYR1 880 aa15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 FNIP2Q9P278 1114 aa15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 USP15Q9Y4E8 981 aaPredicted RBP15.15■□□□□ 0.02
PCDHGC3-208ENST00000622836 VCANP13611 3396 aa15.14■□□□□ 0.01
PCDHGC3-208ENST00000622836 CLIC2O15247 247 aa15.14■□□□□ 0.01
PCDHGC3-208ENST00000622836 LRPAP1P30533 357 aa15.14■□□□□ 0.01
PCDHGC3-208ENST00000622836 HOXD13P35453 343 aa15.14■□□□□ 0.01
PCDHGC3-208ENST00000622836 TFAMQ00059 246 aaKnown RBP15.14■□□□□ 0.01
PCDHGC3-208ENST00000622836 FAM160A1Q05DH4 1040 aa15.14■□□□□ 0.01
PCDHGC3-208ENST00000622836 STK4Q13043 487 aa15.14■□□□□ 0.01
PCDHGC3-208ENST00000622836 SMAD2Q15796 467 aaKnown RBP15.14■□□□□ 0.01
PCDHGC3-208ENST00000622836 KNOP1Q1ED39 458 aaKnown RBP15.14■□□□□ 0.01
PCDHGC3-208ENST00000622836 SYCE2Q6PIF2 218 aa15.14■□□□□ 0.01
PCDHGC3-208ENST00000622836 CD300LGQ6UXG3 332 aa15.14■□□□□ 0.01
PCDHGC3-208ENST00000622836 DSTYKQ6XUX3 929 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms