RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 TOB1P50616 345 aaPredicted RBP26.06■■□□□ 1.76
CPSF1-214ENST00000622776 SLC5A9Q2M3M2 681 aa26.06■■□□□ 1.76
CPSF1-214ENST00000622776 VARS2Q5ST30 1063 aaKnown RBP26.06■■□□□ 1.76
CPSF1-214ENST00000622776 ZSCAN31Q96LW9 406 aaPredicted RBP26.06■■□□□ 1.76
CPSF1-214ENST00000622776 ACAP3Q96P50 834 aa26.06■■□□□ 1.76
CPSF1-214ENST00000622776 KMT5AQ9NQR1 393 aa26.06■■□□□ 1.76
CPSF1-214ENST00000622776 AVENQ9NQS1 362 aaPredicted RBP26.06■■□□□ 1.76
CPSF1-214ENST00000622776 GDE1Q9NZC3 331 aa26.06■■□□□ 1.76
CPSF1-214ENST00000622776 WDR27A2RRH5 827 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 FAM170BA6NMN3 283 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 ECI2O75521 394 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 ABLIM3O94929 683 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 LRG1P02750 347 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 MCF2P10911 925 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 KCNE1P15382 129 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 PTPN2P17706 415 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 U2AF2P26368 475 aaKnown RBP eCLIP26.05■■□□□ 1.76
CPSF1-214ENST00000622776 DRC1Q96MC2 740 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 TCHPQ9BT92 498 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 RUSC1Q9BVN2 902 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 SPATA6Q9NWH7 488 aaPredicted RBP26.05■■□□□ 1.76
CPSF1-214ENST00000622776 RBM19Q9Y4C8 960 aaKnown RBP26.05■■□□□ 1.76
CPSF1-214ENST00000622776 PCDHB6Q9Y5E3 794 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 COL4A3Q01955 1670 aa26.05■■□□□ 1.76
CPSF1-214ENST00000622776 PP2D1A8MPX8 630 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 PRRG1O14668 218 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 SYN3O14994 580 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 TBC1D4O60343 1298 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 CD72P21854 359 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 PROZP22891 400 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 MAPK7Q13164 816 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 KRT79Q5XKE5 535 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 RINT1Q6NUQ1 792 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 POTEHQ6S545 545 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 PLA2G2FQ9BZM2 168 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 LTB4R2Q9NPC1 389 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 DMXL1Q9Y485 3027 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 FRYLO94915 3013 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 CITO14578 2027 aa26.04■■□□□ 1.76
CPSF1-214ENST00000622776 ABLIM1O14639 778 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 LAMTOR5O43504 91 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 ATF2P15336 505 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 CEBPBP17676 345 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 RPL9P32969 192 aaKnown RBP26.03■■□□□ 1.76
CPSF1-214ENST00000622776 ARPP19P56211 112 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 MPZL3Q6UWV2 235 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 C1orf186Q6ZWK4 172 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 TCEAL8Q8IYN2 117 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 KIAA2013Q8IYS2 634 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 C17orf75Q9HAS0 396 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 SH2B1Q9NRF2 756 aaPredicted RBP26.03■■□□□ 1.76
CPSF1-214ENST00000622776 CNTN3Q9P232 1028 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 FBXO4Q9UKT5 387 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 NUB1Q9Y5A7 615 aa26.03■■□□□ 1.76
CPSF1-214ENST00000622776 H7C4K7 107 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 CDC25AP30304 524 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 MRPL58Q14197 206 aaKnown RBP26.02■■□□□ 1.76
CPSF1-214ENST00000622776 IL17AQ16552 155 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 ZNF528Q3MIS6 628 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 ZBTB41Q5SVQ8 909 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 TANGO2Q6ICL3 276 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 TPRG1Q6ZUI0 275 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 KCNK18Q7Z418 384 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 RUBCNQ92622 972 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 C18orf25Q96B23 403 aaPredicted RBP26.02■■□□□ 1.76
CPSF1-214ENST00000622776 HINFPQ9BQA5 517 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 CORO1BQ9BR76 489 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 CYP4F11Q9HBI6 524 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 FBXL5Q9UKA1 691 aa26.02■■□□□ 1.76
CPSF1-214ENST00000622776 SFI1A8K8P3 1242 aa26.01■■□□□ 1.75
CPSF1-214ENST00000622776 LAD1O00515 517 aa26.01■■□□□ 1.75
CPSF1-214ENST00000622776 SLC16A4O15374 487 aa26.01■■□□□ 1.75
CPSF1-214ENST00000622776 MEFVO15553 781 aaPredicted RBP26.01■■□□□ 1.75
CPSF1-214ENST00000622776 SEC24AO95486 1093 aa26.01■■□□□ 1.75
CPSF1-214ENST00000622776 HARSP12081 509 aaKnown RBP26.01■■□□□ 1.75
CPSF1-214ENST00000622776 MAGEA9P43362 315 aa26.01■■□□□ 1.75
CPSF1-214ENST00000622776 PRSS36Q5K4E3 855 aa26.01■■□□□ 1.75
CPSF1-214ENST00000622776 SUMF1Q8NBK3 374 aa26.01■■□□□ 1.75
CPSF1-214ENST00000622776 RMDN1Q96DB5 314 aa26.01■■□□□ 1.75
CPSF1-214ENST00000622776 ZBTB45Q96K62 511 aaPredicted RBP26.01■■□□□ 1.75
CPSF1-214ENST00000622776 NELL2Q99435 816 aa26.01■■□□□ 1.75
CPSF1-214ENST00000622776 MMTAG2Q9BU76 263 aaKnown RBP26.01■■□□□ 1.75
CPSF1-214ENST00000622776 NCOR2Q9Y618 2525 aa26.01■■□□□ 1.75
CPSF1-214ENST00000622776 KINO60870 393 aaKnown RBP26■■□□□ 1.75
CPSF1-214ENST00000622776 TARSP26639 723 aaKnown RBP26■■□□□ 1.75
CPSF1-214ENST00000622776 PRPHP41219 470 aa26■■□□□ 1.75
CPSF1-214ENST00000622776 CTXN3Q4LDR2 81 aa26■■□□□ 1.75
CPSF1-214ENST00000622776 TPGS2Q68CL5 300 aa26■■□□□ 1.75
CPSF1-214ENST00000622776 DTHD1Q6ZMT9 781 aa26■■□□□ 1.75
CPSF1-214ENST00000622776 DCLK2Q8N568 766 aa26■■□□□ 1.75
CPSF1-214ENST00000622776 CLDN23Q96B33 292 aa26■■□□□ 1.75
CPSF1-214ENST00000622776 ELSPBP1Q96BH3 223 aa26■■□□□ 1.75
CPSF1-214ENST00000622776 TCEAL4Q96EI5 215 aa26■■□□□ 1.75
CPSF1-214ENST00000622776 SUSD3Q96L08 255 aa26■■□□□ 1.75
CPSF1-214ENST00000622776 NTPCRQ9BSD7 190 aaKnown RBP26■■□□□ 1.75
CPSF1-214ENST00000622776 INSL5Q9Y5Q6 135 aa26■■□□□ 1.75
CPSF1-214ENST00000622776 ZNF197O14709 1029 aa25.99■■□□□ 1.75
CPSF1-214ENST00000622776 GUCY2CP25092 1073 aa25.99■■□□□ 1.75
CPSF1-214ENST00000622776 CSTF1Q05048 431 aaKnown RBP25.99■■□□□ 1.75
CPSF1-214ENST00000622776 SPIRE2Q8WWL2 714 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms