RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 CYP3A5P20815 502 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 NAB2Q15742 525 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 SLC10A6Q3KNW5 377 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 RESP18Q5W5W9 173 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 TMC5Q6UXY8 1006 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 CCDC149Q6ZUS6 474 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 TDRD5Q8NAT2 981 aaKnown RBP13.4□□□□□ -0.26
CBWD3-218ENST00000622755 SUSD6Q92537 303 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 B3GALT6Q96L58 329 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 TRIM9Q9C026 710 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 S1PR5Q9H228 398 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 ASB7Q9H672 318 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 GOLGA2P5Q9HBQ8 144 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 ZDHHC7Q9NXF8 308 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 DERAQ9Y315 318 aa13.4□□□□□ -0.26
CBWD3-218ENST00000622755 PDCD11Q14690 1871 aaKnown RBP13.4□□□□□ -0.26
CBWD3-218ENST00000622755 A0A087X0B3 334 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 TTC26A0AVF1 554 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 C19orf67A6NJJ6 358 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 IL18RAPO95256 599 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 EFEMP2O95967 443 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 GARTP22102 1010 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 ELF1P32519 619 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 TMEM132DQ14C87 1099 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 ARMCX5Q6P1M9 558 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 PRSS55Q6UWB4 352 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 USP37Q86T82 979 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 NT5DC4Q86YG4 428 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 KREMEN2Q8NCW0 462 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 CMASQ8NFW8 434 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 ZMAT2Q96NC0 199 aaKnown RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 OXCT2Q9BYC2 517 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 CCDC195A0A1B0GUA6 201 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 FRMD3A2A2Y4 597 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 LACTBL1A8MY62 500 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 EIF3DO15371 548 aaKnown RBP eCLIP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 TGM5O43548 720 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 XYLBO75191 536 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 MYL1P05976 194 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 FGFR3P22607 806 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 TNFSF9P41273 254 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 ACOT2P49753 483 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 ENOX2Q16206 610 aaKnown RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 E2F4Q16254 413 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 FAM26FQ5R3K3 315 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 PPM1LQ5SGD2 360 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 AXDND1Q5T1B0 1012 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 ZNF280DQ6N043 979 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 POTEHQ6S545 545 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 UNC13DQ70J99 1090 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 RTL10Q7L3V2 364 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 HS2ST1Q7LGA3 356 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 OTOP3Q7RTS5 596 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 GPR149Q86SP6 731 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 C12orf76Q8N812 135 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 LNX1Q8TBB1 728 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 CACTINQ8WUQ7 758 aaKnown RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 LEO1Q8WVC0 666 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 FIZ1Q96SL8 496 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 C7orf25Q9BPX7 421 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 CPSF3Q9UKF6 684 aaKnown RBP13.39□□□□□ -0.27
CBWD3-218ENST00000622755 BACE2Q9Y5Z0 518 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 STYXL1Q9Y6J8 313 aa13.39□□□□□ -0.27
CBWD3-218ENST00000622755 UBE4BO95155 1302 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 PVALEFA0A1B0GWK0 134 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 LOC730098B7Z3J9 87 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 ANKRD63C9JTQ0 380 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 PI4K2BG5E9Z4 385 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 PPP1R37O75864 691 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 SLFN14P0C7P3 912 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 MYBP10242 640 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 RPL17P18621 184 aaKnown RBP13.38□□□□□ -0.27
CBWD3-218ENST00000622755 CMA1P23946 247 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 LRPAP1P30533 357 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 AFMP43652 599 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 BRCC3P46736 316 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 SOX4Q06945 474 aaPredicted RBP13.38□□□□□ -0.27
CBWD3-218ENST00000622755 SPAG1Q07617 926 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 SURF1Q15526 300 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 TMEM31Q5JXX7 168 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 CNNM4Q6P4Q7 775 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 RNF135Q8IUD6 432 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 SMG7Q92540 1137 aaKnown RBP13.38□□□□□ -0.27
CBWD3-218ENST00000622755 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
CBWD3-218ENST00000622755 FAM213AQ9BRX8 229 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 CXCL16Q9H2A7 254 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 POMKQ9H5K3 350 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 KIAA1586Q9HCI6 787 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 EXOC1Q9NV70 894 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 MTRRQ9UBK8 725 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 TUBGCP4Q9UGJ1 667 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 USTQ9Y2C2 406 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 C2CD2Q9Y426 696 aa13.38□□□□□ -0.27
CBWD3-218ENST00000622755 MTCL1Q9Y4B5 1905 aaKnown RBP13.38□□□□□ -0.27
CBWD3-218ENST00000622755 PLXNA3P51805 1871 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms