RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 CROCCP2Q86T23 111 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 DDX27Q96GQ7 796 aaKnown RBP10.07□□□□□ -0.8
PDPN-212ENST00000621990 FNBP1Q96RU3 617 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 RABEP2Q9H5N1 569 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 APOBEC3GQ9HC16 384 aaKnown RBP10.07□□□□□ -0.8
PDPN-212ENST00000621990 WHRNQ9P202 907 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 UMODL1Q5DID0 1318 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 ZNF541Q9H0D2 1346 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 CLDN3O15551 220 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 ECEL1O95672 775 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 PIK3CAP42336 1068 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 SP4Q02446 784 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 IFFO1Q0D2I5 559 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 PPP1R2P3Q6NXS1 205 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 PHF13Q86YI8 300 aaPredicted RBP10.07□□□□□ -0.8
PDPN-212ENST00000621990 CCDC105Q8IYK2 499 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDPN-212ENST00000621990 MAIP1Q8WWC4 291 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 TMEM143Q96AN5 459 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 FAM84AQ96KN4 292 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 CGRRF1Q99675 332 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 RBAKQ9NYW8 714 aaPredicted RBP10.07□□□□□ -0.8
PDPN-212ENST00000621990 FZD1Q9UP38 647 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 GMNCA6NCL1 334 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 C5orf60A6NFR6 353 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 K7ERI5 159 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 RIPK2O43353 540 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 FAM189A1O60320 539 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 CAND2O75155 1236 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 PROSCO94903 275 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 CALCAP01258 141 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 TNNI1P19237 187 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 TBXAS1P24557 533 aaPredicted RBP10.06□□□□□ -0.8
PDPN-212ENST00000621990 MAN1A1P33908 653 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 NSFP46459 744 aaKnown RBP10.06□□□□□ -0.8
PDPN-212ENST00000621990 ACOT2P49753 483 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 ZNF132P52740 706 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 SEC24CP53992 1094 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 NOMO3P69849 1222 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 FSTL1Q12841 308 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 GRM1Q13255 1194 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 KLF1Q13351 362 aaPredicted RBP10.06□□□□□ -0.8
PDPN-212ENST00000621990 PRAMEF18Q5VWM3 479 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 RHBDF2Q6PJF5 856 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 TADA2BQ86TJ2 420 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 ABRAQ8N0Z2 381 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 UBR7Q8N806 425 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 DEPTORQ8TB45 409 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 SLC7A3Q8WY07 619 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 PCYT2Q99447 389 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 TRIM7Q9C029 511 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 SEMA4AQ9H3S1 761 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 PPME1Q9Y570 386 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 GSTTP1A0A1W2PQM5 241 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 PSTPIP1O43586 416 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 FARP2O94887 1054 aaPredicted RBP10.06□□□□□ -0.8
PDPN-212ENST00000621990 ZBTB7AO95365 584 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 EDN1P05305 212 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 CLTAP09496 248 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 MMP13P45452 471 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 ALDH5A1P51649 535 aaPredicted RBP10.06□□□□□ -0.8
PDPN-212ENST00000621990 SLC29A2Q14542 456 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 PLEKHA7Q6IQ23 1121 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 C6orf89Q6UWU4 347 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 ZPBP2Q6X784 338 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 LBX2Q6XYB7 198 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 TRPM4Q8TD43 1214 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 CPA5Q8WXQ8 436 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 BCCIPQ9P287 314 aaKnown RBP eCLIP10.06□□□□□ -0.8
PDPN-212ENST00000621990 NEU2Q9Y3R4 380 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 OTOFQ9HC10 1997 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 ANKRD65E5RJM6 399 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 E7EVH7 732 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 MEFVO15553 781 aaPredicted RBP10.06□□□□□ -0.8
PDPN-212ENST00000621990 ADCY3O60266 1144 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 UBA1P22314 1058 aaKnown RBP10.06□□□□□ -0.8
PDPN-212ENST00000621990 IVDP26440 423 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 CNTN2Q02246 1040 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 C1QBPQ07021 282 aaKnown RBP10.06□□□□□ -0.8
PDPN-212ENST00000621990 ADCY2Q08462 1091 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 MAMLD1Q13495 774 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 PTK6Q13882 451 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 SKIDA1Q1XH10 827 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 SGO2Q562F6 1265 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 ODF2Q5BJF6 829 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 ZBTB41Q5SVQ8 909 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 C6orf118Q5T5N4 469 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 LMBRD2Q68DH5 695 aaPredicted RBP10.06□□□□□ -0.8
PDPN-212ENST00000621990 SPOPLQ6IQ16 392 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 MFSD5Q6N075 450 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 MICALCLQ6ZW33 695 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 TRMT10CQ7L0Y3 403 aaKnown RBP10.06□□□□□ -0.8
PDPN-212ENST00000621990 ARMC9Q7Z3E5 817 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 CYFIP2Q96F07 1278 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 ZBTB45Q96K62 511 aaPredicted RBP10.06□□□□□ -0.8
PDPN-212ENST00000621990 MSTO1Q9BUK6 570 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 MTFR1LQ9H019 292 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 ADAM7Q9H2U9 754 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 FBXO40Q9UH90 709 aa10.06□□□□□ -0.8
PDPN-212ENST00000621990 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms