RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 GPR20Q99678 358 aa18.71■□□□□ 0.59
FAM3A-222ENST00000621967 SPC25Q9HBM1 224 aa18.71■□□□□ 0.59
FAM3A-222ENST00000621967 ERVK-5Q9HDB9 667 aa18.71■□□□□ 0.59
FAM3A-222ENST00000621967 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.71■□□□□ 0.59
FAM3A-222ENST00000621967 Q9Y3F1 56 aa18.71■□□□□ 0.59
FAM3A-222ENST00000621967 TELO2Q9Y4R8 837 aa18.71■□□□□ 0.59
FAM3A-222ENST00000621967 ALG6Q9Y672 507 aa18.71■□□□□ 0.59
FAM3A-222ENST00000621967 FAM169AQ9Y6X4 670 aa18.71■□□□□ 0.59
FAM3A-222ENST00000621967 A0A087WUV0 522 aaPredicted RBP18.7■□□□□ 0.58
FAM3A-222ENST00000621967 FAM187AA6NFU0 413 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 ANKRD65E5RJM6 399 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 NDUFAB1O14561 156 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 RTN2O75298 545 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 PPFIA2O75334 1257 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 CPP00450 1065 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 FTLP02792 175 aaPredicted RBP18.7■□□□□ 0.58
FAM3A-222ENST00000621967 SUPT20HL2P0C7V6 817 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 YWHABP31946 246 aaKnown RBP18.7■□□□□ 0.58
FAM3A-222ENST00000621967 TCF7P36402 384 aaPredicted RBP18.7■□□□□ 0.58
FAM3A-222ENST00000621967 DHX34Q14147 1143 aaKnown RBP18.7■□□□□ 0.58
FAM3A-222ENST00000621967 BRDTQ58F21 947 aaPredicted RBP18.7■□□□□ 0.58
FAM3A-222ENST00000621967 AGBL2Q5U5Z8 902 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 ZSWIM2Q8NEG5 633 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 PPM1EQ8WY54 764 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 TRIM51Q9BSJ1 452 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 TMEM117Q9H0C3 514 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 DDX20Q9UHI6 824 aaKnown RBP18.7■□□□□ 0.58
FAM3A-222ENST00000621967 NOCTQ9UK39 431 aaKnown RBP18.7■□□□□ 0.58
FAM3A-222ENST00000621967 MSCO60682 206 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 GZMAP12544 262 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 MXI1P50539 228 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 GPC5P78333 572 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 DR1Q01658 176 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 SKIDA1Q1XH10 827 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 NAA35Q5VZE5 725 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 ABHD15Q6UXT9 468 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 FAM71AQ8IYT1 594 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 RPUSD2Q8IZ73 545 aaKnown RBP18.7■□□□□ 0.58
FAM3A-222ENST00000621967 SLC17A8Q8NDX2 589 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 EPS8L1Q8TE68 723 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 UBLCP1Q8WVY7 318 aaPredicted RBP18.7■□□□□ 0.58
FAM3A-222ENST00000621967 RPS6KC1Q96S38 1066 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 DPH5Q9H2P9 285 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 RABEP2Q9H5N1 569 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 ZDHHC18Q9NUE0 388 aa18.7■□□□□ 0.58
FAM3A-222ENST00000621967 GSTTP1A0A1W2PQM5 241 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 MYCP01106 439 aaPredicted RBP18.69■□□□□ 0.58
FAM3A-222ENST00000621967 ADRB2P07550 413 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 CHRNB2P17787 502 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 CPT1AP50416 773 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 UGCGQ16739 394 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 B4GALNT4Q76KP1 1039 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 SPATS2Q86XZ4 545 aaKnown RBP18.69■□□□□ 0.58
FAM3A-222ENST00000621967 ERP44Q9BS26 406 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 AZI2Q9H6S1 392 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 XPNPEP3Q9NQH7 507 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 CTTNBP2NLQ9P2B4 639 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 GABBR1Q9UBS5 961 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 SLC12A6Q9UHW9 1150 aa18.69■□□□□ 0.58
FAM3A-222ENST00000621967 MYH9P35579 1960 aaKnown RBP18.69■□□□□ 0.58
FAM3A-222ENST00000621967 ATG7O95352 703 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 MMP3P08254 477 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 C6orf222P0C671 652 aaPredicted RBP18.68■□□□□ 0.58
FAM3A-222ENST00000621967 DRG2P55039 364 aaKnown RBP18.68■□□□□ 0.58
FAM3A-222ENST00000621967 DHX9Q08211 1270 aaKnown RBP18.68■□□□□ 0.58
FAM3A-222ENST00000621967 ZNF211Q13398 564 aaPredicted RBP18.68■□□□□ 0.58
FAM3A-222ENST00000621967 PRPF4BQ13523 1007 aaKnown RBP18.68■□□□□ 0.58
FAM3A-222ENST00000621967 FAM160B1Q5W0V3 765 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 SWSAP1Q6NVH7 229 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 TADA2BQ86TJ2 420 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 CCDC60Q8IWA6 550 aaPredicted RBP18.68■□□□□ 0.58
FAM3A-222ENST00000621967 ATP6V0A1Q93050 837 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 PCDHB18PQ96TA0 734 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 FMO2Q99518 471 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 ZSWIM1Q9BR11 485 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.68■□□□□ 0.58
FAM3A-222ENST00000621967 ZNF302Q9NR11 478 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 SLC16A4O15374 487 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 PEX3P56589 373 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 FSCN1Q16658 493 aaKnown RBP18.68■□□□□ 0.58
FAM3A-222ENST00000621967 DGKDQ16760 1214 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 NOP9Q86U38 636 aaKnown RBP18.68■□□□□ 0.58
FAM3A-222ENST00000621967 UBL4BQ8N7F7 174 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 SHC3Q92529 594 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 GLG1Q92896 1179 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 KAT5Q92993 513 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 HVCN1Q96D96 273 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 KREMEN1Q96MU8 473 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 UNC93B1Q9H1C4 597 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 ANKEF1Q9NU02 776 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 COQ4Q9Y3A0 265 aa18.68■□□□□ 0.58
FAM3A-222ENST00000621967 BRCA2P51587 3418 aa18.67■□□□□ 0.58
FAM3A-222ENST00000621967 A6NJR5 290 aa18.67■□□□□ 0.58
FAM3A-222ENST00000621967 DKC1O60832 514 aaKnown RBP eCLIP18.67■□□□□ 0.58
FAM3A-222ENST00000621967 PHF2O75151 1096 aa18.67■□□□□ 0.58
FAM3A-222ENST00000621967 SGPL1O95470 568 aa18.67■□□□□ 0.58
FAM3A-222ENST00000621967 PGK1P00558 417 aa18.67■□□□□ 0.58
FAM3A-222ENST00000621967 MYCNP04198 464 aaPredicted RBP18.67■□□□□ 0.58
FAM3A-222ENST00000621967 PEX5P50542 639 aa18.67■□□□□ 0.58
FAM3A-222ENST00000621967 GJA9P57773 515 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms