RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 GRIP2Q9C0E4 1043 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 TRIM45Q9H8W5 580 aaPredicted RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 SH2B2O14492 632 aaPredicted RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 CLDN3O15551 220 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 MYO1DO94832 1006 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 TFE3P19532 575 aaPredicted RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 FBXO31Q5XUX0 539 aaPredicted RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 REXO1L1PQ8IX06 675 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 SLC35G2Q8TBE7 412 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 CHURC1Q8WUH1 139 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 HES6Q96HZ4 224 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 TASP1Q9H6P5 420 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 IP6K2Q9UHH9 426 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 GJA3Q9Y6H8 435 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 EIF3EP60228 445 aaKnown RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 CSTF3Q12996 717 aaKnown RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 B3GNT6Q6ZMB0 384 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 ATL2Q8NHH9 583 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 EPS8L3Q8TE67 593 aaKnown RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 FAM193BQ96PV7 902 aaPredicted RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 TMEM237Q96Q45 408 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 MKNK1Q9BUB5 465 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 CHID1Q9BWS9 393 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 NDFIP2Q9NV92 336 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 FLT3P36888 993 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 TTC39BQ5VTQ0 682 aaPredicted RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 RTCBQ9Y3I0 505 aaKnown RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 FOXN1O15353 648 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 IDH3BO43837 385 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 A1BGP04217 495 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 SESN2P58004 480 aaPredicted RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 CTTNQ14247 550 aaKnown RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 FAM47CQ5HY64 1035 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 MTDHQ86UE4 582 aaKnown RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 ZNF618Q5T7W0 954 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 CEP170P1Q96L14 293 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 MMADHCQ9H3L0 296 aaPredicted RBP12.16□□□□□ -0.46
CLTC-215ENST00000621829 RHOT1Q8IXI2 618 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 ENKURQ8TC29 256 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 STAP2Q9UGK3 403 aa12.16□□□□□ -0.46
CLTC-215ENST00000621829 SLC16A2P36021 539 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 RNF139Q8WU17 664 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 FAM25AB3EWG3 89 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 FAM25CB3EWG5 89 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 FAM25GB3EWG6 89 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 RAD51BO15315 384 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 NR3C1P04150 777 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 GYG1P46976 350 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 CSE1LP55060 971 aaKnown RBP12.15□□□□□ -0.46
CLTC-215ENST00000621829 CNGA2Q16280 664 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 UNC13DQ70J99 1090 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 C5orf58C9J3I9 102 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 ZMYM1Q5SVZ6 1142 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 KCNB2Q92953 911 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 ANKRD27Q96NW4 1050 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 WDR17Q8IZU2 1322 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 ITGAXP20702 1163 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 STXBP2Q15833 593 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 TCHHL1Q5QJ38 904 aaPredicted RBP12.15□□□□□ -0.46
CLTC-215ENST00000621829 RCSD1Q6JBY9 416 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 GLYCTKQ8IVS8 523 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 ARID3BQ8IVW6 561 aaPredicted RBP12.15□□□□□ -0.46
CLTC-215ENST00000621829 GDPD5Q8WTR4 605 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 CENPTQ96BT3 561 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 CITED4Q96RK1 184 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 FAM192AQ9GZU8 254 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 TOP2BQ02880 1626 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 PSMB9P28065 219 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 E2F7Q96AV8 911 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 NLRP4Q96MN2 994 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 ZNF180Q9UJW8 692 aa12.15□□□□□ -0.46
CLTC-215ENST00000621829 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.47
CLTC-215ENST00000621829 TRADDQ15628 312 aa12.15□□□□□ -0.47
CLTC-215ENST00000621829 ZNF57Q68EA5 555 aaPredicted RBP12.15□□□□□ -0.47
CLTC-215ENST00000621829 SPICE1Q8N0Z3 855 aa12.15□□□□□ -0.47
CLTC-215ENST00000621829 RFFLQ8WZ73 363 aa12.15□□□□□ -0.47
CLTC-215ENST00000621829 ZFRQ96KR1 1074 aaKnown RBP12.15□□□□□ -0.47
CLTC-215ENST00000621829 RXFP1Q9HBX9 757 aa12.15□□□□□ -0.47
CLTC-215ENST00000621829 SH3TC1Q8TE82 1336 aa12.15□□□□□ -0.47
CLTC-215ENST00000621829 TBC1D12O60347 775 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 KIZQ2M2Z5 673 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 PROM2Q8N271 834 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 C17orf50Q8WW18 174 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 NGLY1Q96IV0 654 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 TLR2O60603 784 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 PEX3P56589 373 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 ELMO2Q96JJ3 720 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 MAGEB18Q96M61 343 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 LRCH1Q9Y2L9 728 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 CALB1P05937 261 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 SERPINH1P50454 418 aaKnown RBP12.14□□□□□ -0.47
CLTC-215ENST00000621829 CTSWP56202 376 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 CERKLQ49MI3 558 aaPredicted RBP12.14□□□□□ -0.47
CLTC-215ENST00000621829 MIER2Q8N344 545 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 CASKIN2Q8WXE0 1202 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 ZSWIM5Q9P217 1185 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 CHKBQ9Y259 395 aa12.14□□□□□ -0.47
CLTC-215ENST00000621829 PLEKHG2Q9H7P9 1386 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms