RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 HIPK3Q9H422 1215 aa11.49□□□□□ -0.57
CPNE3-212ENST00000621783 ZNHIT6Q9NWK9 470 aaKnown RBP11.49□□□□□ -0.57
CPNE3-212ENST00000621783 KLK14Q9P0G3 267 aa11.49□□□□□ -0.57
CPNE3-212ENST00000621783 PARP2Q9UGN5 583 aa11.49□□□□□ -0.57
CPNE3-212ENST00000621783 ATP11BQ9Y2G3 1177 aa11.49□□□□□ -0.57
CPNE3-212ENST00000621783 DERAQ9Y315 318 aa11.49□□□□□ -0.57
CPNE3-212ENST00000621783 ARHGAP6O43182 974 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 NBNO60934 754 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 CLSTN1O94985 981 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 ASS1P00966 412 aaKnown RBP11.48□□□□□ -0.57
CPNE3-212ENST00000621783 PNMA6AP0CW24 399 aaPredicted RBP11.48□□□□□ -0.57
CPNE3-212ENST00000621783 ITGA4P13612 1032 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 ATF7P17544 494 aaPredicted RBP11.48□□□□□ -0.57
CPNE3-212ENST00000621783 CAPN2P17655 700 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 GUCY2FP51841 1108 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 MYL6P60660 151 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 NOP14P78316 857 aaKnown RBP11.48□□□□□ -0.57
CPNE3-212ENST00000621783 TRPC3Q13507 836 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 DRAP1Q14919 205 aaPredicted RBP11.48□□□□□ -0.57
CPNE3-212ENST00000621783 ARHGAP44Q17R89 818 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 XKR4Q5GH76 650 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 WDR44Q5JSH3 913 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 SPOPLQ6IQ16 392 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 ALKAL1Q6UXT8 129 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 CYP26C1Q6V0L0 522 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 RAD9BQ6WBX8 426 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 PPM1KQ8N3J5 372 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 SYN2Q92777 582 aaPredicted RBP11.48□□□□□ -0.57
CPNE3-212ENST00000621783 LPPQ93052 612 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 TATDN2Q93075 761 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 KREMEN1Q96MU8 473 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 CHP1Q99653 195 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 STK33Q9BYT3 514 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 IMPG2Q9BZV3 1241 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 WNT8AQ9H1J5 351 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 APOBEC3GQ9HC16 384 aaKnown RBP11.48□□□□□ -0.57
CPNE3-212ENST00000621783 UBE2TQ9NPD8 197 aaPredicted RBP11.48□□□□□ -0.57
CPNE3-212ENST00000621783 TUBGCP4Q9UGJ1 667 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 SIX4Q9UIU6 781 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 TBX21Q9UL17 535 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 PLAGL2Q9UPG8 496 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 CENPFP49454 3210 aa11.48□□□□□ -0.57
CPNE3-212ENST00000621783 MEIS3P2A8K0S8 358 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 CST3P01034 146 aaPredicted RBP11.47□□□□□ -0.57
CPNE3-212ENST00000621783 ITGB3P05106 788 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 KCNE1P15382 129 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 POLR2BP30876 1174 aaKnown RBP11.47□□□□□ -0.57
CPNE3-212ENST00000621783 SOX5P35711 763 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 MLH1P40692 756 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 STAT1P42224 750 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 KCNJ6P48051 423 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 CDK17Q00537 523 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 GCNT1Q02742 428 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 MTF1Q14872 753 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 GPNMBQ14956 572 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 ZBTB6Q15916 424 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 ZNF699Q32M78 642 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 PLEKHG4Q58EX7 1191 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 HGSNATQ68CP4 663 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 AGMOQ6ZNB7 445 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 NECAB2Q7Z6G3 386 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 MRPL10Q7Z7H8 261 aaKnown RBP11.47□□□□□ -0.57
CPNE3-212ENST00000621783 TMTC1Q8IUR5 882 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 BEST2Q8NFU1 509 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 CXorf38Q8TB03 319 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 ARID3AQ99856 593 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 XYLT2Q9H1B5 865 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 RGS18Q9NS28 235 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 DPP3Q9NY33 737 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 AIPL1Q9NZN9 384 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 ARHGAP20Q9P2F6 1191 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 ITGA11Q9UKX5 1188 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 UBQLN1Q9UMX0 589 aaKnown RBP11.47□□□□□ -0.57
CPNE3-212ENST00000621783 NUB1Q9Y5A7 615 aa11.47□□□□□ -0.57
CPNE3-212ENST00000621783 A0A0U1RQF3 1178 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 SMIM28A0A1B0GU29 152 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 C9IYK1 514 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 PTGESO14684 152 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 EVI5O60447 810 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 ZNF623O75123 536 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 GFPT2O94808 682 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 SERPING1P05155 500 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 PLEKP08567 350 aaPredicted RBP11.46□□□□□ -0.57
CPNE3-212ENST00000621783 KRT19P08727 400 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 CLTBP09497 229 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 SKIP12755 728 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 FERP16591 822 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 IBSPP21815 317 aaPredicted RBP11.46□□□□□ -0.57
CPNE3-212ENST00000621783 MSNP26038 577 aaKnown RBP11.46□□□□□ -0.57
CPNE3-212ENST00000621783 CYP2C18P33260 490 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 MFAP3P55082 362 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 CCL23P55773 120 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 ARID5AQ03989 594 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 CUL2Q13617 745 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 SGSM1Q2NKQ1 1148 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 TDRD12Q587J7 1177 aaKnown RBP11.46□□□□□ -0.57
CPNE3-212ENST00000621783 ENOSF1Q7L5Y1 443 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 ECHDC2Q86YB7 292 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 C17orf53Q8N3J3 647 aaPredicted RBP11.46□□□□□ -0.57
CPNE3-212ENST00000621783 RNF169Q8NCN4 708 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms