RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 CRY1Q16526 586 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SLC35G1Q2M3R5 365 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 LONRF3Q496Y0 759 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 MCMDC2Q4G0Z9 681 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 HSF5Q4G112 596 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 RTP2Q5QGT7 225 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 UBXN11Q5T124 520 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 FAM171A1Q5VUB5 890 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 LYSMD4Q5XG99 296 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 FSTL4Q6MZW2 842 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 PKN3Q6P5Z2 889 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 IL27RAQ6UWB1 636 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 PRSS55Q6UWB4 352 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SLC36A4Q6YBV0 504 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ATG14Q6ZNE5 492 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ANKS3Q6ZW76 656 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CATSPER4Q7RTX7 472 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 FMNL3Q8IVF7 1028 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 GLYCTKQ8IVS8 523 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ARID3BQ8IVW6 561 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 NAXDQ8IW45 347 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CCDC60Q8IWA6 550 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SIRT2Q8IXJ6 389 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 HACE1Q8IYU2 909 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ELMOD1Q8N336 334 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ENAHQ8N8S7 591 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SMG8Q8ND04 991 aaKnown RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 TSTD1Q8NFU3 115 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 BAHD1Q8TBE0 780 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 BPIFB1Q8TDL5 484 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ING5Q8WYH8 240 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 TTC9Q92623 222 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 FRAT1Q92837 279 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 NXPE2Q96DL1 559 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 TCEAL4Q96EI5 215 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CCDC51Q96ER9 411 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 TMEM176AQ96HP8 235 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ZNF419Q96HQ0 510 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CAMK1GQ96NX5 476 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 LRRC3BQ96PB8 259 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 DCBLD2Q96PD2 775 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 FNBP1Q96RU3 617 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SEMA3CQ99985 751 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CORO1BQ9BR76 489 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 LZTS2Q9BRK4 669 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 FDXACB1Q9BRP7 624 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 GTPBP2Q9BX10 602 aaKnown RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 KRT23Q9C075 422 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CHMP4BQ9H444 224 aaKnown RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 C1orf115Q9H7X2 142 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 IFT122Q9HBG6 1241 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 FBRSL1Q9HCM7 1045 aaKnown RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 GKN1Q9NS71 199 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 AGPAT5Q9NUQ2 364 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 TOR4AQ9NXH8 423 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 GTSE1Q9NYZ3 720 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SUCLA2Q9P2R7 463 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 MTRRQ9UBK8 725 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SUSD2Q9UGT4 822 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 DNMT3LQ9UJW3 386 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 TBX20Q9UMR3 447 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 PCDHA6Q9UN73 950 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 PIN4Q9Y237 131 aaKnown RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 NFE2L3Q9Y4A8 694 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ASB3Q9Y575 518 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 PCDHGA1Q9Y5H4 931 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 PCDHA8Q9Y5H6 950 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 TTC41PQ6P2S7 1318 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 KNTC1P50748 2209 aa2.65□□□□□ -1.98
CPNE3-211ENST00000621526 PLXNA4Q9HCM2 1894 aa2.65□□□□□ -1.98
CPNE3-211ENST00000621526 COL6A6A6NMZ7 2263 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 ITPR3Q14573 2671 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 A0A1B0GUA9 196 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 ESYT2A0FGR8 921 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 H7C4K7 107 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 TMEM189-UBE2V1I3L0A0 370 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 PRRG1O14668 218 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 TLX3O43711 291 aaPredicted RBP2.65□□□□□ -1.99
CPNE3-211ENST00000621526 RNF40O75150 1001 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 EGFP01133 1207 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CFIP05156 583 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CYP3A4P08684 503 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 ATXN1LP0C7T5 689 aaKnown RBP2.65□□□□□ -1.99
CPNE3-211ENST00000621526 MS4A1P11836 297 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 JUPP14923 745 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 GNSP15586 552 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 BCKDHBP21953 392 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 ITPKAP23677 461 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 KIF5BP33176 963 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 SREBF1P36956 1147 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CCR2P41597 374 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 GNAQP50148 359 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 TMPRSS3P57727 454 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CXADRP78310 365 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 MRPS21P82921 87 aaKnown RBP2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CYP4A11Q02928 519 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF33AQ06730 810 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 VAC14Q08AM6 782 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 GRIK3Q13003 919 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms