RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 RAB20Q9NX57 234 aa9.65□□□□□ -0.87
GGA3-222ENST00000621217 NUB1Q9Y5A7 615 aa9.65□□□□□ -0.87
GGA3-222ENST00000621217 ENO4A6NNW6 628 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 PHF20L1A8MW92 1017 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 HMGB1P1B2RPK0 211 aaPredicted RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 RASGRF2O14827 1237 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 TGFB1I1O43294 461 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 PSMD10O75832 226 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 SYF2O95926 243 aaKnown RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 VTNP04004 478 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 WEE2P0C1S8 567 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 SCP2P22307 547 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 CIITAP33076 1130 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 HSD17B3P37058 310 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 PPP3CAQ08209 521 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 PPP2R5DQ14738 602 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 PCNX4Q63HM2 1172 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 PRPF31Q8WWY3 499 aaKnown RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 TATDN2Q93075 761 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 ANKRD36BP1Q96IX9 119 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 ELAC2Q9BQ52 826 aaKnown RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 CALN1Q9BXU9 219 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 PCSK1NQ9UHG2 260 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 ANAPC5Q9UJX4 755 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 TRAF3IP3Q9Y228 551 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 N4BP2Q86UW6 1770 aaPredicted RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 GJB6O95452 261 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 KRT1P04264 644 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 MRPS9P82933 396 aaKnown RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 CRYMQ14894 314 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 TMED2Q15363 201 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 GLRA4Q5JXX5 417 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 TWF2Q6IBS0 349 aaKnown RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 PALB2Q86YC2 1186 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 OR6J1Q8NGC5 347 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 RNF34Q969K3 372 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 TMEM117Q9H0C3 514 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 GANQ9H2C0 597 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 AIPL1Q9NZN9 384 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 AJAP1Q9UKB5 411 aaPredicted RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 F5H423 210 aaPredicted RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 PDHXO00330 501 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 PRKCBP05771 671 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 MARCKSL1P49006 195 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 IRX4P78413 519 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 C1orf186Q6ZWK4 172 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 CTAGE3PQ8IX95 158 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 GPD1LQ8N335 351 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 AFG1LQ8WV93 481 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 P3H4Q92791 437 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 HEXIM2Q96MH2 286 aaKnown RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 CYP39A1Q9NYL5 469 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 TBX20Q9UMR3 447 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 PRRC2BQ5JSZ5 2229 aaKnown RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 ATP2A2P16615 1042 aaKnown RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 PMS2P54278 862 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 HHATQ5VTY9 493 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 LLGL2Q6P1M3 1020 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 FAM47EQ6ZV65 393 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 CCDC89Q8N998 374 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 KRT35Q92764 455 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 C9orf72Q96LT7 481 aa9.64□□□□□ -0.87
GGA3-222ENST00000621217 GBA2Q9HCG7 927 aaPredicted RBP9.64□□□□□ -0.87
GGA3-222ENST00000621217 KCNA3P22001 575 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 NLRP11P59045 1033 aaKnown RBP9.63□□□□□ -0.87
GGA3-222ENST00000621217 LONRF1Q17RB8 773 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 KIZQ2M2Z5 673 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 MOXD1Q6UVY6 613 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 IRF2BP2Q7Z5L9 587 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 FBXO25Q8TCJ0 367 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 PIK3R5Q8WYR1 880 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 SYN2Q92777 582 aaPredicted RBP9.63□□□□□ -0.87
GGA3-222ENST00000621217 SLC5A5Q92911 643 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 MED10Q9BTT4 135 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 CNOT10Q9H9A5 744 aaKnown RBP9.63□□□□□ -0.87
GGA3-222ENST00000621217 KCNG1Q9UIX4 513 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 MAGED2Q9UNF1 606 aaPredicted RBP9.63□□□□□ -0.87
GGA3-222ENST00000621217 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.63□□□□□ -0.87
GGA3-222ENST00000621217 ANKRD63C9JTQ0 380 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 OATP04181 439 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 GNA15P30679 374 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 DRP2Q13474 957 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 ZNF699Q32M78 642 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 DNAJC24Q6P3W2 148 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 CATSPERGQ6ZRH7 1159 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 JAMLQ86YT9 394 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 SRRM1Q8IYB3 904 aaKnown RBP9.63□□□□□ -0.87
GGA3-222ENST00000621217 CHST13Q8NET6 341 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 GMLQ99445 158 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 TSPYL2Q9H2G4 693 aaPredicted RBP9.63□□□□□ -0.87
GGA3-222ENST00000621217 EIF3DO15371 548 aaKnown RBP eCLIP9.63□□□□□ -0.87
GGA3-222ENST00000621217 TLR3O15455 904 aaKnown RBP9.63□□□□□ -0.87
GGA3-222ENST00000621217 HIRAP54198 1017 aaPredicted RBP9.63□□□□□ -0.87
GGA3-222ENST00000621217 PPP2R5EQ16537 467 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 VSIG10LQ86VR7 867 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 OR6B3Q8NGW1 331 aa9.63□□□□□ -0.87
GGA3-222ENST00000621217 LNX1Q8TBB1 728 aaPredicted RBP9.63□□□□□ -0.87
GGA3-222ENST00000621217 RUBCNQ92622 972 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms