RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 C1orf127Q8N9H9 656 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 C3orf58Q8NDZ4 430 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 TMC2Q8TDI7 906 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 HASPINQ8TF76 798 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 CLP1Q92989 425 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 ELMO3Q96BJ8 720 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 TIFAQ96CG3 184 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 CNOT6LQ96LI5 555 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 FNBP1Q96RU3 617 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 HSD3B7Q9H2F3 369 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 CBX8Q9HC52 389 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 FANCLQ9NW38 375 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 MARCH5Q9NX47 278 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 DPP3Q9NY33 737 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 UBQLN1Q9UMX0 589 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 DERAQ9Y315 318 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 C2CD2Q9Y426 696 aa11.83□□□□□ -0.52
POLR2J3-221ENST00000621093 EPOPA6NHQ4 379 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 RFXAPO00287 272 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 PODXLO00592 558 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 KIF4AO95239 1232 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 FGFR1OPO95684 399 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 C4BPAP04003 597 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 ALDH2P05091 517 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 ITGB3P05106 788 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 TMEM191BP0C7N4 346 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 LAG3P18627 525 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 CYP3A5P20815 502 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 CTNNB1P35222 781 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 BMPR1AP36894 532 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 GCLMP48507 274 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 ZNF445P59923 1031 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 ERVK-21P61565 698 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 CLDN10P78369 228 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 UPP1Q16831 310 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 EPC2Q52LR7 807 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 DCAF17Q5H9S7 520 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 TCERG1LQ5VWI1 586 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 C9orf57Q5W0N0 161 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 FRMD5Q7Z6J6 570 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 SLC39A11Q8N1S5 342 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 BEST2Q8NFU1 509 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 CXorf38Q8TB03 319 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 SLC35C1Q96A29 364 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 ANKRD36BP1Q96IX9 119 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 ZNF558Q96NG5 402 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 BPIFA3Q9BQP9 254 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 TMEM175Q9BSA9 504 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 TSPY26PQ9H489 355 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 THAP9Q9H5L6 903 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 SLC28A3Q9HAS3 691 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 SLC38A7Q9NVC3 462 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 ARMCX3Q9UH62 379 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 SIX4Q9UIU6 781 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 FAN1Q9Y2M0 1017 aa11.82□□□□□ -0.52
POLR2J3-221ENST00000621093 ANO9A1A5B4 782 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 KCNJ18B7U540 433 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 I3L4J1 428 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 LRRN2O75325 713 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 VNN1O95497 513 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 CST3P01034 146 aaPredicted RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 TNNC2P02585 160 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 KRT19P08727 400 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 LRPAP1P30533 357 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 POLR2BP30876 1174 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 BRCC3P46736 316 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 MARSP56192 900 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 MCCD1P59942 119 aaPredicted RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 KCNJ12Q14500 433 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 HSP90AA2PQ14568 343 aaPredicted RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 DUOXA2Q1HG44 320 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 HABP4Q5JVS0 413 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 CDKAL1Q5VV42 579 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 TDRD10Q5VZ19 366 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 TRAPPC11Q7Z392 1133 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 LUZP1Q86V48 1076 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 NT5DC4Q86YG4 428 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 TRIM59Q8IWR1 403 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 KLHL23Q8NBE8 558 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 CACTINQ8WUQ7 758 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 ARNTL2Q8WYA1 636 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 RSPH1Q8WYR4 309 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 TGS1Q96RS0 853 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 TSPAN18Q96SJ8 248 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 VN1R3Q9BXE9 311 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 NAT10Q9H0A0 1025 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 TTYH1Q9H313 450 aaPredicted RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 METTL14Q9HCE5 456 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 AGAP1Q9UPQ3 857 aa11.81□□□□□ -0.52
POLR2J3-221ENST00000621093 PIRO00625 290 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 IKBKBO14920 756 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 SPTLC1O15269 473 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 XPOTO43592 962 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 CSPG5O95196 566 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 GNA14O95837 355 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 ATP1A3P13637 1013 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 MTIF2P46199 727 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 ALDH7A1P49419 539 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 BIRC3Q13489 604 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms