RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 NAT16Q8N8M0 369 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 CABLES1Q8TDN4 633 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 TSPAN18Q96SJ8 248 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ROGDIQ9GZN7 287 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ABCB10Q9NRK6 738 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 IQANK1A0A1B0GTG1 560 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 RASSF9O75901 435 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ERBB3P21860 1342 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 COASYQ13057 564 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 LPCAT4Q643R3 524 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 COMTP21964 271 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 GSSP48637 474 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ARL4CP56559 192 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 SLC25A3Q00325 362 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 TSTA3Q13630 321 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 UBE2Q1Q7Z7E8 422 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 AMIGO2Q86SJ2 522 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 FOXP4Q8IVH2 680 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ZBTB8BQ8NAP8 495 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 PTGES3LE9PB15 166 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ANPEPP15144 967 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 SERPINB10P48595 397 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 FNTAP49354 379 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 EIF4A1P60842 406 aaKnown RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 KHDC1Q4VXA5 237 aaKnown RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 C3orf62Q6ZUJ4 267 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 PWWP2AQ96N64 755 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 CYP26A1O43174 497 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 HOXA13P31271 388 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 GYG1P46976 350 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 DNASE1L3Q13609 305 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 TXNRD1Q16881 649 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 NEK5Q6P3R8 708 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 SIPA1Q96FS4 1042 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 WRNIP1Q96S55 665 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 PTPRHQ9HD43 1115 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 EMILIN3Q9NT22 766 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 H0YC42 278 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 FCHO1O14526 889 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 SEMA3EO15041 775 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 NEK8Q86SG6 692 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 NLRP10Q86W26 655 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 DRAXINQ8NBI3 349 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ACSBG1Q96GR2 724 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 STK33Q9BYT3 514 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 MRPL40Q9NQ50 206 aaKnown RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 POTEMA6NI47 508 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 BANF1O75531 89 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 GSNP06396 782 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 RARAP10276 462 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 YWHAHQ04917 246 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 CREG2Q8IUH2 290 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ATAD3AQ9NVI7 634 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 KIF17Q9P2E2 1029 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 RAD51BO15315 384 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 RGS20O76081 388 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 TMEM191BP0C7N4 346 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PTGS2P35354 604 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 FSCBQ5H9T9 825 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 DDIASQ8IXT1 998 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ELMO1Q92556 727 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PPP2R3CQ969Q6 453 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 TUBGCP5Q96RT8 1024 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 CHID1Q9BWS9 393 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 INTS2Q9H0H0 1204 aaKnown RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 NSD2O96028 1365 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 GOLGA8TH3BQL2 631 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 LINGO3P0C6S8 592 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 GHRP10912 638 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PSMA2P25787 234 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 BPIFB4P59827 614 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 SLC45A4Q5BKX6 768 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 KCTD1Q719H9 257 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 DEFB107AQ8IZN7 70 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 FAM71DQ8N9W8 422 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ST13P5Q8NFI4 369 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 TSPAN14Q8NG11 270 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 CDC26Q8NHZ8 85 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ANO3Q9BYT9 981 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 SFMBT1Q9UHJ3 866 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 TAGLN3Q9UI15 199 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 FAM237BA0A1B0GVD1 139 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 AGPSO00116 658 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 KPNA4O00629 521 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 KCNJ6P48051 423 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 KRT76Q01546 638 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 TBX2Q13207 712 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 SNRNP48Q6IEG0 339 aaKnown RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 DPP8Q6V1X1 898 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ACAD11Q709F0 780 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 FAM13CQ8NE31 585 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 FHDC1Q9C0D6 1143 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ZSCAN9O15535 394 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 BAG3O95817 575 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 AMPD1P23109 780 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PHKA1P46020 1223 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 DMC1Q14565 340 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 CDR2LQ86X02 465 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 SPOCK2Q92563 424 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 LARP4BQ92615 738 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms