RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 STK33Q9BYT3 514 aa11□□□□□ -0.65
VPS11-207ENST00000620429 DRC3Q9H069 523 aa11□□□□□ -0.65
VPS11-207ENST00000620429 TPK1Q9H3S4 243 aa11□□□□□ -0.65
VPS11-207ENST00000620429 SCHIP1Q9P0W5 487 aaPredicted RBP11□□□□□ -0.65
VPS11-207ENST00000620429 DNAJB4Q9UDY4 337 aa11□□□□□ -0.65
VPS11-207ENST00000620429 RABL2BQ9UNT1 228 aa11□□□□□ -0.65
VPS11-207ENST00000620429 TELO2Q9Y4R8 837 aa11□□□□□ -0.65
VPS11-207ENST00000620429 N6AMT1Q9Y5N5 214 aa11□□□□□ -0.65
VPS11-207ENST00000620429 GYS1P13807 737 aa11□□□□□ -0.65
VPS11-207ENST00000620429 TECP42680 631 aa11□□□□□ -0.65
VPS11-207ENST00000620429 DRG2P55039 364 aaKnown RBP11□□□□□ -0.65
VPS11-207ENST00000620429 PUS10Q3MIT2 529 aaKnown RBP11□□□□□ -0.65
VPS11-207ENST00000620429 HGSNATQ68CP4 663 aa11□□□□□ -0.65
VPS11-207ENST00000620429 DUPD1Q68J44 220 aa11□□□□□ -0.65
VPS11-207ENST00000620429 DYMQ7RTS9 669 aa11□□□□□ -0.65
VPS11-207ENST00000620429 FAM186BQ8IYM0 893 aa11□□□□□ -0.65
VPS11-207ENST00000620429 MGARPQ8TDB4 240 aa11□□□□□ -0.65
VPS11-207ENST00000620429 FNBP1Q96RU3 617 aa11□□□□□ -0.65
VPS11-207ENST00000620429 PITPNM3Q9BZ71 974 aa11□□□□□ -0.65
VPS11-207ENST00000620429 EDEM3Q9BZQ6 932 aa11□□□□□ -0.65
VPS11-207ENST00000620429 CCDC113Q9H0I3 377 aa11□□□□□ -0.65
VPS11-207ENST00000620429 GBA3Q9H227 469 aa11□□□□□ -0.65
VPS11-207ENST00000620429 DKK3Q9UBP4 350 aa11□□□□□ -0.65
VPS11-207ENST00000620429 NPHP3-ACAD11A0A0J9YXS1 232 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 TIMM44O43615 452 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 KDM1AO60341 852 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 CCNT1O60563 726 aaKnown RBP10.99□□□□□ -0.65
VPS11-207ENST00000620429 OPHN1O60890 802 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 STK10O94804 968 aaKnown RBP10.99□□□□□ -0.65
VPS11-207ENST00000620429 OXSR1O95747 527 aaPredicted RBP10.99□□□□□ -0.65
VPS11-207ENST00000620429 ZBED1O96006 694 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 TBL3Q12788 808 aaKnown RBP10.99□□□□□ -0.65
VPS11-207ENST00000620429 MOGSQ13724 837 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 HSP90AA5PQ58FG0 334 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 ZNF449Q6P9G9 518 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 SFR1Q86XK3 245 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 PNMA1Q8ND90 353 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 ARHGEF2Q92974 986 aaKnown RBP10.99□□□□□ -0.65
VPS11-207ENST00000620429 CALML4Q96GE6 196 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 RBM38Q9H0Z9 239 aaKnown RBP10.99□□□□□ -0.65
VPS11-207ENST00000620429 CCPG1Q9ULG6 757 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 GPC6Q9Y625 555 aaPredicted RBP10.99□□□□□ -0.65
VPS11-207ENST00000620429 NUMBLQ9Y6R0 609 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 RPTORQ8N122 1335 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 SPTLC1O15269 473 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 ZNF862O60290 1169 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 TAC1P20366 129 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 ATP5DP30049 168 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 PLCB3Q01970 1234 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 ARID5AQ03989 594 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 KLHDC10Q6PID8 442 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 SV2BQ7L1I2 683 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 NLGN1Q8N2Q7 840 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 SLC44A5Q8NCS7 719 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 DDX12PQ92771 950 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.99□□□□□ -0.65
VPS11-207ENST00000620429 MAK16Q9BXY0 300 aaKnown RBP10.99□□□□□ -0.65
VPS11-207ENST00000620429 TRPC7Q9HCX4 862 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 DDX18Q9NVP1 670 aaKnown RBP10.99□□□□□ -0.65
VPS11-207ENST00000620429 STX8Q9UNK0 236 aa10.99□□□□□ -0.65
VPS11-207ENST00000620429 FAM196BA6NMK8 535 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 NDC80O14777 642 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 MAGEB2O15479 319 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 CCDC22O60826 627 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 CBX6O95503 412 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 LDHBP07195 334 aaKnown RBP10.98□□□□□ -0.65
VPS11-207ENST00000620429 STX2P32856 288 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 TMED10P49755 219 aaKnown RBP10.98□□□□□ -0.65
VPS11-207ENST00000620429 RPL26P61254 145 aaKnown RBP10.98□□□□□ -0.65
VPS11-207ENST00000620429 COBLL1Q53SF7 1204 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 FAAH2Q6GMR7 532 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 RBM44Q6ZP01 1051 aaKnown RBP10.98□□□□□ -0.65
VPS11-207ENST00000620429 CEP70Q8NHQ1 597 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 DTX3LQ8TDB6 740 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 TRPC4APQ8TEL6 797 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 RPGRQ92834 1020 aaKnown RBP10.98□□□□□ -0.65
VPS11-207ENST00000620429 PPP1R10Q96QC0 940 aaKnown RBP10.98□□□□□ -0.65
VPS11-207ENST00000620429 CCT7Q99832 543 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 ERP44Q9BS26 406 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 BTBD10Q9BSF8 475 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 HGH1Q9BTY7 390 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 CELF4Q9BZC1 486 aaKnown RBP10.98□□□□□ -0.65
VPS11-207ENST00000620429 NT5C3AQ9H0P0 336 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 ATAD3AQ9NVI7 634 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 DBR1Q9UK59 544 aaKnown RBP10.98□□□□□ -0.65
VPS11-207ENST00000620429 CARD8Q9Y2G2 431 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 GIT1Q9Y2X7 761 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 WDR90Q96KV7 1748 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 SPDYE16A6NNV3 312 aaPredicted RBP10.98□□□□□ -0.65
VPS11-207ENST00000620429 GSC2O15499 205 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 ADCY3O60266 1144 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 MGEA5O60502 916 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 ADAM23O75077 832 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 UFL1O94874 794 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 SERPINB2P05120 415 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 SERPING1P05155 500 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 PLCG2P16885 1265 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 RPL5P46777 297 aaKnown RBP10.98□□□□□ -0.65
VPS11-207ENST00000620429 TFAP4Q01664 338 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 CDC16Q13042 620 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms