RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 SEPT9Q9UHD8 586 aaPredicted RBP32.07■■■□□ 2.72
KHSRP-213ENST00000619396 GHRP10912 638 aa32.07■■■□□ 2.72
KHSRP-213ENST00000619396 SCTRP47872 440 aa32.07■■■□□ 2.72
KHSRP-213ENST00000619396 PPP1R7Q15435 360 aa32.07■■■□□ 2.72
KHSRP-213ENST00000619396 CCDC197Q8NCU1 140 aa32.07■■■□□ 2.72
KHSRP-213ENST00000619396 XPNPEP1Q9NQW7 623 aa32.07■■■□□ 2.72
KHSRP-213ENST00000619396 UNGP13051 313 aaPredicted RBP32.06■■■□□ 2.72
KHSRP-213ENST00000619396 ACTR2P61160 394 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 CALCOCO2Q13137 446 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 RDM1Q8NG50 284 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 ZNF526Q8TF50 670 aaPredicted RBP32.06■■■□□ 2.72
KHSRP-213ENST00000619396 SLC9A2Q9UBY0 812 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 CALCAP01258 141 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 PRKCEQ02156 737 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 CNTN2Q02246 1040 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 GCNT1Q02742 428 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 KRT17Q04695 432 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 LLGL1Q15334 1064 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 SGO2Q562F6 1265 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 LRRC34Q8IZ02 419 aa32.06■■■□□ 2.72
KHSRP-213ENST00000619396 MAFGO15525 162 aa32.05■■■□□ 2.72
KHSRP-213ENST00000619396 TREML2Q5T2D2 321 aa32.05■■■□□ 2.72
KHSRP-213ENST00000619396 OTUD6AQ7L8S5 288 aa32.05■■■□□ 2.72
KHSRP-213ENST00000619396 PRMT1Q99873 361 aaKnown RBP32.05■■■□□ 2.72
KHSRP-213ENST00000619396 PLVAPQ9BX97 442 aa32.05■■■□□ 2.72
KHSRP-213ENST00000619396 CDC42EP4Q9H3Q1 356 aaKnown RBP32.05■■■□□ 2.72
KHSRP-213ENST00000619396 ANAPC7Q9UJX3 599 aa32.05■■■□□ 2.72
KHSRP-213ENST00000619396 PSAPP07602 524 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 IVDP26440 423 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 MAPK4P31152 587 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 CCDC25Q86WR0 208 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 MCOLN2Q8IZK6 566 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 ATP6V0A1Q93050 837 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 DDX23Q9BUQ8 820 aaKnown RBP32.04■■■□□ 2.72
KHSRP-213ENST00000619396 AVENQ9NQS1 362 aaPredicted RBP32.04■■■□□ 2.72
KHSRP-213ENST00000619396 CCT8L1PA6NM43 557 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 USP2O75604 605 aaPredicted RBP32.04■■■□□ 2.72
KHSRP-213ENST00000619396 CNGA2Q16280 664 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 EXOC3L1Q86VI1 746 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 POMGNT1Q8WZA1 660 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 PI4K2AQ9BTU6 479 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 TRIM7Q9C029 511 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 CHST7Q9NS84 486 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 WDR90Q96KV7 1748 aa32.04■■■□□ 2.72
KHSRP-213ENST00000619396 ATP2A1O14983 1001 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 KRT5P13647 590 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 ITIH2P19823 946 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 ENPEPQ07075 957 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 ABHD15Q6UXT9 468 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 ENOSF1Q7L5Y1 443 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 TAX1BP1Q86VP1 789 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.03■■■□□ 2.721e-21■■□□□ 12.8
KHSRP-213ENST00000619396 HERPUD2Q9BSE4 406 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 MROH7Q68CQ1 1323 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 SCP2P22307 547 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 SNX1Q13596 522 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 USP37Q86T82 979 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 GPD1LQ8N335 351 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 C17orf75Q9HAS0 396 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 PDLIM7Q9NR12 457 aa32.03■■■□□ 2.72
KHSRP-213ENST00000619396 MYH9P35579 1960 aaKnown RBP32.03■■■□□ 2.72
KHSRP-213ENST00000619396 SPATA31C2B4DYI2 1134 aa32.02■■■□□ 2.72
KHSRP-213ENST00000619396 MKRN4PQ13434 485 aaPredicted RBP32.02■■■□□ 2.72
KHSRP-213ENST00000619396 ITIH4Q14624 930 aa32.02■■■□□ 2.72
KHSRP-213ENST00000619396 MTERF2Q49AM1 385 aa32.02■■■□□ 2.72
KHSRP-213ENST00000619396 C15orf39Q6ZRI6 1047 aa32.02■■■□□ 2.72
KHSRP-213ENST00000619396 FUKQ8N0W3 1084 aa32.02■■■□□ 2.72
KHSRP-213ENST00000619396 MYPNQ86TC9 1320 aa32.02■■■□□ 2.72
KHSRP-213ENST00000619396 ZC3H11AO75152 810 aaKnown RBP eCLIP32.02■■■□□ 2.72
KHSRP-213ENST00000619396 TAOK1Q7L7X3 1001 aa32.02■■■□□ 2.72
KHSRP-213ENST00000619396 TAS1R3Q7RTX0 852 aa32.02■■■□□ 2.72
KHSRP-213ENST00000619396 ZNF516Q92618 1163 aa32.02■■■□□ 2.72
KHSRP-213ENST00000619396 CYP26B1Q9NR63 512 aa32.02■■■□□ 2.72
KHSRP-213ENST00000619396 HOXC10Q9NYD6 342 aa32.02■■■□□ 2.72
KHSRP-213ENST00000619396 CHKAP35790 457 aa32.01■■■□□ 2.71
KHSRP-213ENST00000619396 PTK6Q13882 451 aa32.01■■■□□ 2.71
KHSRP-213ENST00000619396 VGLL4Q14135 290 aa32.01■■■□□ 2.71
KHSRP-213ENST00000619396 SYDE1Q6ZW31 735 aaPredicted RBP32.01■■■□□ 2.71
KHSRP-213ENST00000619396 SNCAIPQ9Y6H5 919 aa32.01■■■□□ 2.71
KHSRP-213ENST00000619396 XRCC4Q13426 336 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 LONRF1Q17RB8 773 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 CCDC38Q502W7 563 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 DDX27Q96GQ7 796 aaKnown RBP32■■■□□ 2.71
KHSRP-213ENST00000619396 HAUS2Q9NVX0 235 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 NFASCO94856 1347 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 DNAJC8O75937 253 aaPredicted RBP32■■■□□ 2.71
KHSRP-213ENST00000619396 ATP4AP20648 1035 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 GARTP22102 1010 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 RRM1P23921 792 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 SLC1A1P43005 524 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 NOL9Q5SY16 702 aaKnown RBP32■■■□□ 2.71
KHSRP-213ENST00000619396 MAIP1Q8WWC4 291 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 ATG4AQ8WYN0 398 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 FAM81BQ96LP2 452 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 SERPINB12Q96P63 405 aa32■■■□□ 2.71
KHSRP-213ENST00000619396 POLR3FQ9H1D9 316 aaPredicted RBP32■■■□□ 2.71
KHSRP-213ENST00000619396 ANKS4BQ8N8V4 417 aa31.99■■■□□ 2.71
KHSRP-213ENST00000619396 SNF8Q96H20 258 aa31.99■■■□□ 2.71
KHSRP-213ENST00000619396 DCLK3Q9C098 648 aa31.99■■■□□ 2.71
KHSRP-213ENST00000619396 ASIC3Q9UHC3 531 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms