RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 LRRC43Q8N309 656 aa11.9□□□□□ -0.5
SNORD3D-201ENST00000619178 LRRC52Q8N7C0 313 aa11.9□□□□□ -0.5
SNORD3D-201ENST00000619178 ZSWIM2Q8NEG5 633 aa11.9□□□□□ -0.5
SNORD3D-201ENST00000619178 NT5C1BQ96P26 610 aa11.9□□□□□ -0.5
SNORD3D-201ENST00000619178 GAD1Q99259 594 aa11.9□□□□□ -0.5
SNORD3D-201ENST00000619178 EDEM3Q9BZQ6 932 aa11.9□□□□□ -0.5
SNORD3D-201ENST00000619178 NUCKS1Q9H1E3 243 aaKnown RBP11.9□□□□□ -0.5
SNORD3D-201ENST00000619178 RAB20Q9NX57 234 aa11.9□□□□□ -0.5
SNORD3D-201ENST00000619178 KLK14Q9P0G3 267 aa11.9□□□□□ -0.5
SNORD3D-201ENST00000619178 ZMYND8Q9ULU4 1186 aaPredicted RBP11.9□□□□□ -0.5
SNORD3D-201ENST00000619178 SLC4A7Q9Y6M7 1214 aa11.9□□□□□ -0.5
SNORD3D-201ENST00000619178 TSC2P49815 1807 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 OFD1O75665 1012 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 ADCY5O95622 1261 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 C4BPAP04003 597 aaKnown RBP11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 CCDC172P0C7W6 258 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 SYN1P17600 705 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 ITGB8P26012 769 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 WDR5P61964 334 aaKnown RBP11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 DLG4P78352 724 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 PPP3CAQ08209 521 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 NCOA4Q13772 614 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 SV2CQ496J9 727 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 ZNF365Q70YC5 407 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 APTXQ7Z2E3 356 aaKnown RBP11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 CACNA2D4Q7Z3S7 1137 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 EHBP1Q8NDI1 1231 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 HELQQ8TDG4 1101 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 LINC01599Q8WXQ3 324 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 HERVK_113Q902F9 699 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 LPPQ93052 612 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 TOP1MTQ969P6 601 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 ZBED2Q9BTP6 218 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 OSBPL7Q9BZF2 842 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 PLCB1Q9NQ66 1216 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 AAASQ9NRG9 546 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 IMPACTQ9P2X3 320 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 STK39Q9UEW8 545 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 INPP5FQ9Y2H2 1132 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 COL4A6Q14031 1691 aa11.89□□□□□ -0.51
SNORD3D-201ENST00000619178 TRAPPC3O43617 180 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 UPP2O95045 317 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 STAU1O95793 577 aaKnown RBP11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 HLA-DRAP01903 254 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 ITGB3P05106 788 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 NFICP08651 508 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 ACRP10323 421 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 LRPAP1P30533 357 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 SCNN1GP51170 649 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 MFAP3P55082 362 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 SYCP1Q15431 976 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 ZBTB6Q15916 424 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 ZNF699Q32M78 642 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 FIGNQ5HY92 759 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 ZNF667Q5HYK9 610 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 TRIM65Q6PJ69 517 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 C15orf39Q6ZRI6 1047 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 OTOP2Q7RTS6 562 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 EFCAB13Q8IY85 973 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 CMTR2Q8IYT2 770 aaKnown RBP11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 JAKMIP2Q96AA8 810 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 ZFP42Q96MM3 310 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 NAP1L5Q96NT1 182 aaPredicted RBP11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 POP1Q99575 1024 aaKnown RBP11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 TMEM175Q9BSA9 504 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 APEX2Q9UBZ4 518 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 FBXL5Q9UKA1 691 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 INSL6Q9Y581 213 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 BRCA2P51587 3418 aa11.88□□□□□ -0.51
SNORD3D-201ENST00000619178 TBKBP1A7MCY6 615 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 DGKIO75912 1065 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 ALDH2P05091 517 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 TAF6P49848 677 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 GSDMDP57764 484 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 TNNC1P63316 161 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 CCDC173Q0VFZ6 552 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 ELAVL2Q12926 359 aaKnown RBP11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 CBWD6Q4V339 395 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 EPC2Q52LR7 807 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 CBWD3Q5JTY5 395 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 GLRA4Q5JXX5 417 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 CBWD5Q5RIA9 395 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 TMEM240Q5SV17 173 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 C1orf220Q5T0J3 134 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 SPOUT1Q5T280 376 aaKnown RBP11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 TDRD10Q5VZ19 366 aaKnown RBP11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 CNGA4Q8IV77 575 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 VSTM4Q8IW00 320 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 OR5B17Q8NGF7 314 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 PLEKHO2Q8TD55 490 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 HPDLQ96IR7 371 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 YME1L1Q96TA2 773 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 COLEC11Q9BWP8 271 aa11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 INTS2Q9H0H0 1204 aaKnown RBP11.87□□□□□ -0.51
SNORD3D-201ENST00000619178 VRTNQ9H8Y1 702 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms