RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 XRRA1Q6P2D8 792 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 C6orf89Q6UWU4 347 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 NIPA1Q7RTP0 329 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 DNAAF5Q86Y56 855 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 LRRC34Q8IZ02 419 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 MYCT1Q8N699 235 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 NSMCE1Q8WV22 266 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 RAB3IPQ96QF0 476 aaPredicted RBP7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 MMP19Q99542 508 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 PCDHB9Q9Y5E1 797 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 PFASO15067 1338 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 RPTORQ8N122 1335 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 A0A0A6YYK5 440 aaPredicted RBP7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 SH3BP5O60239 455 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 CHRNA3P32297 505 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 PSMC2P35998 433 aaKnown RBP7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 FKBP1BP68106 108 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 ELF3P78545 371 aaPredicted RBP7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 SARNPP82979 210 aaKnown RBP7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 LACTB2Q53H82 288 aaPredicted RBP7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 HYIQ5T013 277 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 ERMARDQ5T6L9 678 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 JAMLQ86YT9 394 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 RHOT2Q8IXI1 618 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 SYT2Q8N9I0 419 aaPredicted RBP7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 SLC35G2Q8TBE7 412 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 MAGEC3Q8TD91 643 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 HSD17B14Q9BPX1 270 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 ECT2Q9H8V3 914 aa7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 CNOT8Q9UFF9 292 aaKnown RBP7.46□□□□□ -1.22
SRGAP3-213ENST00000618999 ATAD5Q96QE3 1844 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 MIF4GDA9UHW6 222 aaKnown RBP7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 WDR64B1ANS9 1081 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 ASAP2O43150 1006 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 PON1P27169 355 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 PCK1P35558 622 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 QARSP47897 775 aaKnown RBP7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 NPEPPSP55786 919 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 KRT76Q01546 638 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 SLC29A2Q14542 456 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 OTUD6AQ7L8S5 288 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 LMNTD2Q8IXW0 634 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 GPRC5AQ8NFJ5 357 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 SCFD1Q8WVM8 642 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 CENPTQ96BT3 561 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 GPRASP2Q96D09 838 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 CARD9Q9H257 536 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 NEUROG2Q9H2A3 272 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 GANQ9H2C0 597 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 SPATS2LQ9NUQ6 558 aaKnown RBP7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 TYW1Q9NV66 732 aaKnown RBP7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 DOCK1Q14185 1865 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 BTBD19C9JJ37 291 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 PDXKO00764 312 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 MAFGO15525 162 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 SLC26A4O43511 780 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 PAEPP09466 180 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 ALDH3A1P30838 453 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 FLT3P36888 993 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 CYP2J2P51589 502 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 MESDQ14696 234 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 SPDYCQ5MJ68 293 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 GLG1Q92896 1179 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 MS4A3Q96HJ5 214 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 REEP2Q9BRK0 252 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 ALG2Q9H553 416 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 DNAJC12Q9UKB3 198 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 USP15Q9Y4E8 981 aaPredicted RBP7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 EXOC3O60645 756 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 LRRN2O75325 713 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 TMEM253P0C7T8 217 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 FGFR4P22455 802 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 CTHP32929 405 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 SOX5P35711 763 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 SLC12A3P55017 1021 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 PTENP60484 403 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 GHRHRQ02643 423 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 LRRC14Q15048 493 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 CCDC38Q502W7 563 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 XKR9Q5GH70 373 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 WLSQ5T9L3 541 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 GPAT2Q6NUI2 795 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 NT5DC3Q86UY8 548 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 BRI3BPQ8WY22 251 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 DNAJC19Q96DA6 116 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 SPDL1Q96EA4 605 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 PGM2Q96G03 612 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 IWS1Q96ST2 819 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 SPOCK3Q9BQ16 436 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 RUSC1Q9BVN2 902 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 GGT7Q9UJ14 662 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 PCDHA10Q9Y5I2 948 aa7.45□□□□□ -1.22
SRGAP3-213ENST00000618999 C5orf60A6NFR6 353 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 SOCS7O14512 581 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 PPFIA2O75334 1257 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 PARNO95453 639 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ECEL1O95672 775 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 NEFHP12036 1026 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 COPB2P35606 906 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ALDH5A1P51649 535 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms