RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 SLC5A5Q92911 643 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 NCAPGQ9BPX3 1015 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 ECT2Q9H8V3 914 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 CYP26B1Q9NR63 512 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 KCNQ5Q9NR82 932 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 C19orf81C9J6K1 198 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 KRT38O76015 456 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 RARRES1P49788 294 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 TMPRSS15P98073 1019 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 IFRD2Q12894 506 aaPredicted RBP14.71□□□□□ -0.05
CNOT3-210ENST00000618939 TAF11Q15544 211 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 MAP3K21Q5TCX8 1036 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 ATG16L1Q676U5 607 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 NXNQ6DKJ4 435 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 NT5DC3Q86UY8 548 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 PPM1NQ8N819 430 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 HAUS2Q9NVX0 235 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 DCTN4Q9UJW0 460 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 USP15Q9Y4E8 981 aaPredicted RBP14.71□□□□□ -0.05
CNOT3-210ENST00000618939 CYP3A7-CYP3A51PA0A087WV96 503 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 CYP3A7P24462 503 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 CDH6P55285 790 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 BCAR1P56945 870 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 DEPDC1BQ8WUY9 529 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 SPATA33Q96N06 139 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 GANQ9H2C0 597 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 BCAP29Q9UHQ4 241 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 NEU2Q9Y3R4 380 aa14.71□□□□□ -0.05
CNOT3-210ENST00000618939 PARP4Q9UKK3 1724 aaKnown RBP14.71□□□□□ -0.05
CNOT3-210ENST00000618939 TAF12Q16514 161 aa14.71□□□□□ -0.06
CNOT3-210ENST00000618939 FOXR2Q6PJQ5 311 aa14.71□□□□□ -0.06
CNOT3-210ENST00000618939 APTXQ7Z2E3 356 aaKnown RBP14.71□□□□□ -0.06
CNOT3-210ENST00000618939 ANKMY2Q8IV38 441 aa14.71□□□□□ -0.06
CNOT3-210ENST00000618939 SEPT1Q8WYJ6 367 aa14.71□□□□□ -0.06
CNOT3-210ENST00000618939 FAM129AQ9BZQ8 928 aa14.71□□□□□ -0.06
CNOT3-210ENST00000618939 FOXP3Q9BZS1 431 aa14.71□□□□□ -0.06
CNOT3-210ENST00000618939 CASZ1Q86V15 1759 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 CYP3A4P08684 503 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 ROR1Q01973 937 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 CENPCQ03188 943 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 SGSM1Q2NKQ1 1148 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 C4orf19Q8IY42 314 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 POP1Q99575 1024 aaKnown RBP14.7□□□□□ -0.06
CNOT3-210ENST00000618939 ABCC6O95255 1503 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 GCKP35557 465 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 ACTR2P61160 394 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 ECM1Q16610 540 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 BZW1Q7L1Q6 419 aaKnown RBP14.7□□□□□ -0.06
CNOT3-210ENST00000618939 SLC47A2Q86VL8 602 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 ZC3H18Q86VM9 953 aaKnown RBP14.7□□□□□ -0.06
CNOT3-210ENST00000618939 SIX6OS1Q8N1H7 587 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 SYTL5Q8TDW5 730 aaPredicted RBP14.7□□□□□ -0.06
CNOT3-210ENST00000618939 ATG4AQ8WYN0 398 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 RAPGEF5Q92565 580 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 ADAM33Q9BZ11 813 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 FAM198AQ9UFP1 575 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 ZFP69BQ9UJL9 534 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 CAND2O75155 1236 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 SYF2O95926 243 aaKnown RBP14.7□□□□□ -0.06
CNOT3-210ENST00000618939 VIL1P09327 827 aaKnown RBP14.7□□□□□ -0.06
CNOT3-210ENST00000618939 PIGHQ14442 188 aaPredicted RBP14.7□□□□□ -0.06
CNOT3-210ENST00000618939 TTLL4Q14679 1199 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 C11orf63Q6NUN7 778 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 SPATA24Q86W54 205 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 FEZF2Q8TBJ5 459 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 CCT6BQ92526 530 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 DEFB129Q9H1M3 183 aa14.7□□□□□ -0.06
CNOT3-210ENST00000618939 RARGP13631 454 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 TM4SF1P30408 202 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 MAGEA4P43358 317 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 EIF3EP60228 445 aaKnown RBP14.69□□□□□ -0.06
CNOT3-210ENST00000618939 CBWD6Q4V339 395 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 C2CD6Q53TS8 623 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 CBWD3Q5JTY5 395 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 CBWD5Q5RIA9 395 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 RAB3IL1Q8TBN0 382 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 TMC2Q8TDI7 906 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 SGSM3Q96HU1 749 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 AGO4Q9HCK5 861 aaKnown RBP14.69□□□□□ -0.06
CNOT3-210ENST00000618939 RGPD2P0DJD1 1756 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 PCNX4Q63HM2 1172 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 C1orf186Q6ZWK4 172 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 RAPH1Q70E73 1250 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 SV2AQ7L0J3 742 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.69□□□□□ -0.06
CNOT3-210ENST00000618939 PDCD2LQ9BRP1 358 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 TOPORSQ9NS56 1045 aaPredicted RBP14.69□□□□□ -0.06
CNOT3-210ENST00000618939 FGFR1OP2Q9NVK5 253 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 MAP3K20Q9NYL2 800 aaKnown RBP14.69□□□□□ -0.06
CNOT3-210ENST00000618939 TPX2Q9ULW0 747 aaKnown RBP14.69□□□□□ -0.06
CNOT3-210ENST00000618939 GIPC1O14908 333 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 RFC5P40937 340 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 CUL2Q13617 745 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 PRPSAP1Q14558 356 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 MXD4Q14582 209 aaPredicted RBP14.69□□□□□ -0.06
CNOT3-210ENST00000618939 PRAMEF18Q5VWM3 479 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 ARMCX2Q7L311 632 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 EPS8L3Q8TE67 593 aaKnown RBP14.69□□□□□ -0.06
CNOT3-210ENST00000618939 OTUD5Q96G74 571 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 KCTD10Q9H3F6 313 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms