RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 ALBP02768 609 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 NPR3P17342 541 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CDH3P22223 829 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CYP3A7P24462 503 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 MZF1P28698 734 aaPredicted RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 MYL6P60660 151 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 GSTM4Q03013 218 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 RNASELQ05823 741 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 GRM3Q14832 879 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 SLC9A5Q14940 896 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ZNF124Q15973 351 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 MAP3K11Q16584 847 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 MYLK3Q32MK0 819 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CCDC153Q494R4 210 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 LARP1Q6PKG0 1096 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ZYG11AQ6WRX3 759 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 AGMOQ6ZNB7 445 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 GPR142Q7Z601 462 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 KRT73Q86Y46 540 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ITPRIPQ8IWB1 547 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 AGBL5Q8NDL9 886 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 NLGN2Q8NFZ4 835 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 SLC30A5Q8TAD4 765 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 GTF3C6Q969F1 213 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ACAP3Q96P50 834 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 SEC62Q99442 399 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 USB1Q9BQ65 265 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 DDX23Q9BUQ8 820 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 SAP130Q9H0E3 1048 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 RSAD1Q9HA92 442 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 PDLIM7Q9NR12 457 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CIDEBQ9UHD4 219 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 HOOK1Q9UJC3 728 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ANAPC5Q9UJX4 755 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 DDX19BQ9UMR2 479 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 PCDHB6Q9Y5E3 794 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CPDO75976 1380 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 FLT1P17948 1338 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 SCN7AQ01118 1682 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 LOC100653049A0A140TA62 436 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 F5H0A9 414 aaPredicted RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CDK2AP1O14519 115 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 FYB1O15117 783 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 AXIN1O15169 862 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 HRO43593 1189 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 IDH3BO43837 385 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 MAFKO60675 156 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 AOC2O75106 756 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 KRT34O76011 436 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ABCB1P08183 1280 aaPredicted RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 SLC3A2P08195 630 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 POLR2EP19388 210 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ATP5F1P24539 256 aaPredicted RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 VPS41P49754 854 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 HNMTP50135 292 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 NR1H3Q13133 447 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 PPFIA1Q13136 1202 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CBX3Q13185 183 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ITGA7Q13683 1181 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CWF19L2Q2TBE0 894 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ARHGAP29Q52LW3 1261 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CEP78Q5JTW2 689 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ZBTB41Q5SVQ8 909 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 SH3PXD2AQ5TCZ1 1133 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 HS2ST1Q7LGA3 356 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 NLRP8Q86W28 1048 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 C12orf56Q8IXR9 622 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ARL14Q8N4G2 192 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 OR6S1Q8NH40 331 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 SLC22A8Q8TCC7 542 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 YIPF4Q9BSR8 244 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 TXLNGYQ9BZA5 131 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 TCF7L1Q9HCS4 588 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 EHD2Q9NZN4 543 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 EMC3Q9P0I2 261 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CXXC1Q9P0U4 656 aaPredicted RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ANKRD26Q9UPS8 1709 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 AP3D1O14617 1153 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 PDPK1O15530 556 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ACTN4O43707 911 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 NIPSNAP2O75323 286 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ASMTLO95671 621 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CCDC166P0CW27 439 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 VAV1P15498 845 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 RAG1P15918 1043 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CFL1P23528 166 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 LSP1P33241 339 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 TRIM23P36406 574 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 PLCD1P51178 756 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 ALDH18A1P54886 795 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 FKBP4Q02790 459 aaKnown RBP eCLIP4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 CETN1Q12798 172 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 SPARCL1Q14515 664 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 SNCBQ16143 134 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 PCSK7Q16549 785 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 MOGQ16653 247 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 IGSF11Q5DX21 431 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 GPR158Q5T848 1215 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 SEZ6L2Q6UXD5 910 aa4.37□□□□□ -1.71
UBE2D3-233ENST00000618836 TTLL7Q6ZT98 887 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms