RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 REEP2Q9BRK0 252 aa12.9□□□□□ -0.35
SRRT-216ENST00000618262 C16orf70Q9BSU1 422 aa12.9□□□□□ -0.35
SRRT-216ENST00000618262 EYSQ5T1H1 3165 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 MGEA5O60502 916 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 LINGO3P0C6S8 592 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 CCL5P13501 91 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 INSRRP14616 1297 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 RARRES1P49788 294 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 ORC2Q13416 577 aaPredicted RBP12.89□□□□□ -0.35
SRRT-216ENST00000618262 HIC1Q14526 733 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 NUGGCQ68CJ6 796 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 ARL6IP6Q8N6S5 226 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 PPTC7Q8NI37 304 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 ZNF75CPQ92670 426 aaPredicted RBP12.89□□□□□ -0.35
SRRT-216ENST00000618262 DNAJC25Q9H1X3 360 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 SFNP31947 248 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 TSPAN7P41732 249 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 POLGP54098 1239 aaPredicted RBP12.89□□□□□ -0.35
SRRT-216ENST00000618262 DPCR1Q3MIW9 517 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 TMEM119Q4V9L6 283 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 RINT1Q6NUQ1 792 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 HDXQ7Z353 690 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 OSTM1Q86WC4 334 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 NELFCDQ8IXH7 590 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 TRMT44Q8IYL2 757 aaKnown RBP12.89□□□□□ -0.35
SRRT-216ENST00000618262 TBC1D20Q96BZ9 403 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 NACC1Q96RE7 527 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 FAM204AQ9H8W3 233 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 KCTD5Q9NXV2 234 aa12.89□□□□□ -0.35
SRRT-216ENST00000618262 CEP290O15078 2479 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 NFASCO94856 1347 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 HOXC13P31276 330 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 SLC12A3P55017 1021 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 CAMK2BQ13554 666 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 SUZ12Q15022 739 aaKnown RBP12.88□□□□□ -0.35
SRRT-216ENST00000618262 INAQ16352 499 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 HERC4Q5GLZ8 1057 aaPredicted RBP12.88□□□□□ -0.35
SRRT-216ENST00000618262 CCDC122Q5T0U0 273 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 CCAR2Q8N163 923 aaKnown RBP12.88□□□□□ -0.35
SRRT-216ENST00000618262 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 DIS3LQ8TF46 1054 aaKnown RBP12.88□□□□□ -0.35
SRRT-216ENST00000618262 DHX38Q92620 1227 aaKnown RBP12.88□□□□□ -0.35
SRRT-216ENST00000618262 DDX27Q96GQ7 796 aaKnown RBP12.88□□□□□ -0.35
SRRT-216ENST00000618262 TRIM9Q9C026 710 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.88□□□□□ -0.351e-20■■■■□ 22.3
SRRT-216ENST00000618262 SPC25Q9HBM1 224 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 PREBQ9HCU5 417 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 CCDC151A5D8V7 595 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 RASA4BC9J798 803 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 TEX28O15482 410 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 SRGAP2CP0DJJ0 459 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 BMP6P22004 513 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 S100A5P33763 92 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 MRPL28Q13084 256 aaKnown RBP12.88□□□□□ -0.35
SRRT-216ENST00000618262 ITGA7Q13683 1181 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 ZC2HC1CQ53FD0 456 aaPredicted RBP12.88□□□□□ -0.35
SRRT-216ENST00000618262 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 CTU1Q7Z7A3 348 aaKnown RBP12.88□□□□□ -0.35
SRRT-216ENST00000618262 AFAP1L1Q8TED9 768 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 DYDC1Q8WWB3 177 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 NT5C3AQ9H0P0 336 aa12.88□□□□□ -0.35
SRRT-216ENST00000618262 CCDC169A6NNP5 214 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 TFRCP02786 760 aaKnown RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 VTNP04004 478 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 TROVE2P10155 538 aaKnown RBP eCLIP12.87□□□□□ -0.35
SRRT-216ENST00000618262 TAOK1Q7L7X3 1001 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 CDR2LQ86X02 465 aaPredicted RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 MYCT1Q8N699 235 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 GIMAP8Q8ND71 665 aaPredicted RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 LZICQ8WZA0 190 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 NLRP4Q96MN2 994 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 CYP26B1Q9NR63 512 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 KCND1Q9NSA2 647 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 KDM3AQ9Y4C1 1321 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 TMEM247A6NEH6 219 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 DUSP11O75319 330 aaKnown RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 NMT1P30419 496 aaKnown RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 GUCY2FP51841 1108 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 CASP5P51878 434 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 STK4Q13043 487 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 SIM2Q14190 667 aaPredicted RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 LHX8Q68G74 356 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 B4GALNT4Q76KP1 1039 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 ACMSDQ8TDX5 336 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 SENP6Q9GZR1 1112 aaPredicted RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 TUFT1Q9NNX1 390 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 ERAP1Q9NZ08 941 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 ATXN10Q9UBB4 475 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 MAFBQ9Y5Q3 323 aaPredicted RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 TMCC1O94876 653 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 CTSHP09668 335 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 PEX3P56589 373 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 MAP7Q14244 749 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 BRD3Q15059 726 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 SKIV2LQ15477 1246 aaKnown RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 CRY1Q16526 586 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 PABPC1LQ4VXU2 614 aaKnown RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 FAM160B1Q5W0V3 765 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 TMEM53Q6P2H8 277 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms