RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 SLC26A2P50443 739 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 EFNA5P52803 228 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 TNFAIP2Q03169 654 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 TRIM32Q13049 653 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 MXD4Q14582 209 aaPredicted RBP18.79■□□□□ 0.6
CNOT3-209ENST00000617930 IFI16Q16666 785 aaKnown RBP18.79■□□□□ 0.6
CNOT3-209ENST00000617930 IQSEC1Q6DN90 963 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 CCNI2Q6ZMN8 369 aaPredicted RBP18.79■□□□□ 0.6
CNOT3-209ENST00000617930 PEX26Q7Z412 305 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 OR6J1Q8NGC5 347 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 NLRP4Q96MN2 994 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 CGRRF1Q99675 332 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 FZD8Q9H461 694 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 DDX3YO15523 660 aaKnown RBP18.79■□□□□ 0.6
CNOT3-209ENST00000617930 ZC3H11AO75152 810 aaKnown RBP eCLIP18.79■□□□□ 0.6
CNOT3-209ENST00000617930 LDHAP00338 332 aaKnown RBP18.79■□□□□ 0.6
CNOT3-209ENST00000617930 IGBP1P78318 339 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 CDR2Q01850 454 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 DCAF12L1Q5VU92 463 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 CPNE8Q86YQ8 564 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 TMEM130Q8N3G9 435 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 LINC01465Q8N7H1 131 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 GOLGA6L1Q8N7Z2 621 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 TCP11Q8WWU5 503 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 TRIB2Q92519 343 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 MRPL4Q9BYD3 311 aaKnown RBP18.79■□□□□ 0.6
CNOT3-209ENST00000617930 SLC5A4Q9NY91 659 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 ERAP1Q9NZ08 941 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 RNF14Q9UBS8 474 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 NUB1Q9Y5A7 615 aa18.79■□□□□ 0.6
CNOT3-209ENST00000617930 DYNC1LI2O43237 492 aaPredicted RBP18.78■□□□□ 0.6
CNOT3-209ENST00000617930 PHACTR2O75167 634 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 RTN2O75298 545 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 CFHP08603 1231 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 GZMAP12544 262 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 MCL1Q07820 350 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 BIRC3Q13489 604 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 EEF1DP3Q658K8 133 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 BRSK2Q8IWQ3 736 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 CEP120Q8N960 986 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 USP38Q8NB14 1042 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 SOCS4Q8WXH5 440 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 PLEKHA4Q9H4M7 779 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 IFT122Q9HBG6 1241 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 MEFVO15553 781 aaPredicted RBP18.78■□□□□ 0.6
CNOT3-209ENST00000617930 GAS2O43903 313 aaKnown RBP18.78■□□□□ 0.6
CNOT3-209ENST00000617930 CAPN2P17655 700 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 ACTN2P35609 894 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 PIK3CAP42336 1068 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 PRKCZQ05513 592 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 MBTD1Q05BQ5 628 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 TCEAL1Q15170 157 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 MAPK6Q16659 721 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 TMEM192Q8IY95 271 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 CPSF3Q9UKF6 684 aaKnown RBP18.78■□□□□ 0.6
CNOT3-209ENST00000617930 HPCAL4Q9UM19 191 aa18.78■□□□□ 0.6
CNOT3-209ENST00000617930 CES2O00748 559 aa18.77■□□□□ 0.6
CNOT3-209ENST00000617930 KRT5P13647 590 aa18.77■□□□□ 0.6
CNOT3-209ENST00000617930 YY1P25490 414 aa18.77■□□□□ 0.6
CNOT3-209ENST00000617930 FLT3LGP49771 235 aa18.77■□□□□ 0.6
CNOT3-209ENST00000617930 PTENP60484 403 aa18.77■□□□□ 0.6
CNOT3-209ENST00000617930 TSHZ1Q6ZSZ6 1077 aa18.77■□□□□ 0.6
CNOT3-209ENST00000617930 GDAP1L1Q96MZ0 367 aa18.77■□□□□ 0.6
CNOT3-209ENST00000617930 PPP1R16BQ96T49 567 aa18.77■□□□□ 0.6
CNOT3-209ENST00000617930 TCHPQ9BT92 498 aa18.77■□□□□ 0.6
CNOT3-209ENST00000617930 ZSCAN5CA6NGD5 496 aaPredicted RBP18.76■□□□□ 0.59
CNOT3-209ENST00000617930 ACKR2O00590 384 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 CEP104O60308 925 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 GLI1P08151 1106 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 VEGFBP49765 207 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 HADHBP55084 474 aaKnown RBP18.76■□□□□ 0.59
CNOT3-209ENST00000617930 GPC5P78333 572 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 ACTRT1Q8TDG2 376 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 LMBR1Q8WVP7 490 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 ALG3Q92685 438 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 KAT2BQ92831 832 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 C1orf112Q9NSG2 853 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 DNAH12Q6ZR08 3092 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 RNF40O75150 1001 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 PPFIA4O75335 1185 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 AARSP49588 968 aaKnown RBP eCLIP18.76■□□□□ 0.59
CNOT3-209ENST00000617930 PDE6CP51160 858 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 CUL2Q13617 745 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 HIC1Q14526 733 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 TRADDQ15628 312 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 ENOSF1Q7L5Y1 443 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 TLK2Q86UE8 772 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 ZBTB8OSQ8IWT0 167 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 RASGEF1CQ8N431 466 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 TAF4BQ92750 862 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 PBKQ96KB5 322 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 BTBD6Q96KE9 485 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 RNF186Q9NXI6 227 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 NR2E1Q9Y466 385 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 ALG6Q9Y672 507 aa18.76■□□□□ 0.59
CNOT3-209ENST00000617930 MYADML2A6NDP7 307 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 A6NJR5 290 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 H3BRB1 525 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 INO80B-WBP1J3KQ70 363 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 OGTO15294 1046 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms