RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TBC1D14Q9P2M4 693 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 K7ERI5 159 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 IGSF6O95976 241 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 HAND2P61296 217 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 HIST2H2ACQ16777 129 aaPredicted RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 HIST2H2AA3Q6FI13 130 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 LRRC8DQ7L1W4 858 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 AVILO75366 819 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 EIF2AK2P19525 551 aaKnown RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 CHRNB4P30926 498 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 HLA-DQA1Q5Y7H0 255 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 FBXO44Q9H4M3 255 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 ARHGAP26Q9UNA1 814 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 HIST1H2AGP0C0S8 130 aaPredicted RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 HIST1H2ADP20671 130 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 DGLUCYQ7Z3D6 616 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 STAG2Q8N3U4 1231 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 HIST1H2AHQ96KK5 128 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 HIST1H2AJQ99878 128 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 H2AFJQ9BTM1 129 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 SUPT3HB4E1H0 165 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 ANXA5P08758 320 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 GOLGA8HP0CJ92 632 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 GYG1P46976 350 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 NFE2Q16621 373 aaPredicted RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 FSCN1Q16658 493 aaKnown RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 MTMR14Q8NCE2 650 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 TBC1D16Q8TBP0 767 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CXorf40AQ8TE69 158 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 ARHGAP39Q9C0H5 1083 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 SPTLC3Q9NUV7 552 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 VPS4BO75351 444 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 TNNT1P13805 278 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 TBXAS1P24557 533 aaPredicted RBP3.55□□□□□ -1.84
LPP-220ENST00000617246 HADHAP40939 763 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 STAT1P42224 750 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 TAB3Q8N5C8 712 aaPredicted RBP3.55□□□□□ -1.84
LPP-220ENST00000617246 SPG21Q9NZD8 308 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 F5H5T6 163 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 PCDH8O95206 1070 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 IL18RAPO95256 599 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 BACE1P56817 501 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 PAK1Q13153 545 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 NEK8Q86SG6 692 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 ZNF410Q86VK4 478 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 ACCSQ96QU6 501 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 RAD18Q9NS91 495 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 RRM1P23921 792 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 PPP2R2AP63151 447 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 C6orf132Q5T0Z8 1188 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 BRAPQ7Z569 592 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 MORC4Q8TE76 937 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 CCDC51Q96ER9 411 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 SMARCAL1Q9NZC9 954 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 TDP2O95551 362 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 SLC2A3P11169 496 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 XRCC5P13010 732 aaKnown RBP3.55□□□□□ -1.84
LPP-220ENST00000617246 TAS2R50P59544 299 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 SMC5Q8IY18 1101 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 LIX1Q8N485 282 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 CCDC124Q96CT7 223 aaKnown RBP3.55□□□□□ -1.84
LPP-220ENST00000617246 MRPL4Q9BYD3 311 aaKnown RBP3.55□□□□□ -1.84
LPP-220ENST00000617246 STK17AQ9UEE5 414 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 MID2Q9UJV3 735 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 NEURL1BA8MQ27 555 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 SLC11A2P49281 568 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 KLHL7Q8IXQ5 586 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 LZTR1Q8N653 840 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 OSBPL1AQ9BXW6 950 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 COL24A1Q17RW2 1714 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 POTEB3A0JP26 581 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 SPOPO43791 374 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 CHEK2O96017 543 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 GH2P01242 217 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 SYN1P17600 705 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 TECP42680 631 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 RHBDL3P58872 404 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 ASIC2Q16515 512 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 TTLL9Q3SXZ7 439 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 POTEBQ6S5H4 581 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 VSTM1Q6UX27 236 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 IFNLR1Q8IU57 520 aaPredicted RBP3.55□□□□□ -1.84
LPP-220ENST00000617246 SLC7A14Q8TBB6 771 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 CYP4F11Q9HBI6 524 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 STMN3Q9NZ72 180 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 FGFR3P22607 806 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 PTPN9P43378 593 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 SPICE1Q8N0Z3 855 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 TTC8Q8TAM2 541 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 C1orf115Q9H7X2 142 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 BCAP29Q9UHQ4 241 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 KLRF2D3W0D1 207 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 MICAL2O94851 1124 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 HSD17B4P51659 736 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 TRIM14Q14142 442 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 ZNF394Q53GI3 561 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 KLHL24Q6TFL4 600 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 LCTLQ6UWM7 567 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 RNF217Q8TC41 542 aa3.55□□□□□ -1.84
LPP-220ENST00000617246 ZSWIM4Q9H7M6 989 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms