RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SMAD3P84022 425 aaKnown RBP16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 ENPEPQ07075 957 aa16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 KCNJ12Q14500 433 aa16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 CDKAL1Q5VV42 579 aa16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 TMEM175Q9BSA9 504 aa16.89■□□□□ 0.29
PCDHGC3-204ENST00000617222 PTPRSQ13332 1948 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 NT5C1B-RDH14C9J2C7 533 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 C4BPAP04003 597 aaKnown RBP16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 GALTP07902 379 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 LAG3P18627 525 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 PBX3P40426 434 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 GCLMP48507 274 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 SLC11A1P49279 550 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 AP3M2P53677 418 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 BCAR1P56945 870 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 PPP3CAQ08209 521 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 LRIT3Q3SXY7 679 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 TCP11X2Q5H9J9 407 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 SCARA3Q6AZY7 606 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 KCNT2Q6UVM3 1135 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 TRAPPC11Q7Z392 1133 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 TRIM59Q8IWR1 403 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 C1orf127Q8N9H9 656 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 SLC35C1Q96A29 364 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 DDX27Q96GQ7 796 aaKnown RBP16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 PAAF1Q9BRP4 392 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 HSD3B7Q9H2F3 369 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 FAN1Q9Y2M0 1017 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 PRG3Q9Y2Y8 225 aaPredicted RBP16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 COL4A6Q14031 1691 aa16.88■□□□□ 0.29
PCDHGC3-204ENST00000617222 PODXLO00592 558 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 NRP1O14786 923 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 STX10O60499 249 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 PHACTR2O75167 634 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 LINC00271P0C7V0 271 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 ZNF18P17022 549 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 LRPAP1P30533 357 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 RPL9P32969 192 aaKnown RBP16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 ALDH7A1P49419 539 aaKnown RBP16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 CLCNKBP51801 687 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 BIRC3Q13489 604 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 C9orf57Q5W0N0 161 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 SV2AQ7L0J3 742 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 COLGALT1Q8NBJ5 622 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 RNF214Q8ND24 703 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 CLP1Q92989 425 aaKnown RBP16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 UROC1Q96N76 676 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 ZNF558Q96NG5 402 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 COLEC11Q9BWP8 271 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 AAASQ9NRG9 546 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 AGAP1Q9UPQ3 857 aa16.87■□□□□ 0.29
PCDHGC3-204ENST00000617222 F8W810 466 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 GOLGA6L19H0YKK7 550 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 PPEF2O14830 753 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 ITGB3P05106 788 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 KRT19P08727 400 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 PRKCSHP14314 528 aaPredicted RBP16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 IGFBP6P24592 240 aaPredicted RBP16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 DNAJB2P25686 324 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 EEF1GP26641 437 aaKnown RBP16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 POLR2BP30876 1174 aaKnown RBP16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 GTF2H1P32780 548 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 BMPR1AP36894 532 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 TPM4P67936 248 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 RBP5P82980 135 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 TAP1Q03518 808 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 KCNH2Q12809 1159 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 UPP1Q16831 310 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 TDRD10Q5VZ19 366 aaKnown RBP16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 DCLRE1AQ6PJP8 1040 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 SPRED2Q7Z698 418 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 GAS2L3Q86XJ1 694 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 TIFAQ96CG3 184 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 TUBGCP2Q9BSJ2 902 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 C17orf80Q9BSJ5 609 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 SLC28A3Q9HAS3 691 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 TMEM8AQ9HCN3 771 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 SIX4Q9UIU6 781 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 ITGA11Q9UKX5 1188 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 R3HCC1Q9Y3T6 440 aaKnown RBP16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 PCDHB12Q9Y5F1 795 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 CITO14578 2027 aa16.86■□□□□ 0.29
PCDHGC3-204ENST00000617222 FNDC1Q4ZHG4 1894 aaPredicted RBP16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 ANO9A1A5B4 782 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 PIRO00625 290 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 B3GAT3O94766 335 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 CST3P01034 146 aaPredicted RBP16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 AFPP02771 609 aaKnown RBP16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 ATP1A3P13637 1013 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 CTNNB1P35222 781 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 TRPC3Q13507 836 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 KRT31Q15323 416 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 MAN2A1Q16706 1144 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 ZACNQ401N2 412 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 PPP2R2DQ66LE6 453 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 C15orf39Q6ZRI6 1047 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 ANKRD20A12PQ8NF67 263 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 CXorf38Q8TB03 319 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms